Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene66278 SustainPine v3.0 416
• AutoFact: Unassigned protein
• FL-Next: tr=Chromodomain helicase-DNA-binding protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene66558 SustainPine v3.0 476
• AutoFact: AT-hook motif nuclear-localized protein 19 [Arabidopsis thaliana] gb|AAF04888.1|AC011437_3 hypothetical protein [Arabidopsis thaliana] gb|AAM62794.1| putative DNA-binding protein [Arabidopsis thaliana] gb|AAO64817.1| At3g04570 [Arabidopsis thaliana] dbj|B 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene67302 SustainPine v3.0 190
• AutoFact: DNA glycosylase n=2 Tax=Populus trichocarpa RepID=B9HW11_POPTR 5.0e-21
• FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 1.725e-08
Internal
sp_v3.0_unigene68426 SustainPine v3.0 333
• AutoFact: AT-hook DNA-binding protein n=1 Tax=Catharanthus roseus RepID=A1DR80_CATRO 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DNA-binding protein-like 8.686e-20
Internal
sp_v3.0_unigene68889 SustainPine v3.0 219
• AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 5.434e-39
Internal
sp_v3.0_unigene70113 SustainPine v3.0 429
• AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 4.0e-10
• FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Serine endopeptidase degp2, putative 1.192e-12
Putative C-terminus
sp_v3.0_unigene70695 SustainPine v3.0 260
• AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 5.0e-29
• FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Pathogenesis-related homeodomain protein 1.612e-08
Internal
sp_v3.0_unigene72686 SustainPine v3.0 315
• AutoFact: DNA binding / nucleic acid binding / protein binding / zinc ion binding 3.0e-18
• FL-Next: sp=Zinc finger CCCH domain-containing protein 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene72713 SustainPine v3.0 251
• AutoFact: JmjC domain containing protein 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ENBP1 protein 4.26e-08
Putative N-terminus
sp_v3.0_unigene72906 SustainPine v3.0 251
• AutoFact: Unassigned protein 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene73121 SustainPine v3.0 194
• AutoFact: Transparent testa 12 protein n=1 Tax=Zea mays RepID=B6SV36_MAIZE 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multidrug resistance pump, putative 1.36e-14
Internal
sp_v3.0_unigene73135 SustainPine v3.0 268
• AutoFact: histone-like protein [Fritillaria liliacea] 4.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Histone H1 0.0
Internal
sp_v3.0_unigene73434 SustainPine v3.0 168
• AutoFact: JmjC domain containing protein 9.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ENBP1 protein 4.65e-08
Putative N-terminus
sp_v3.0_unigene73703 SustainPine v3.0 470
• AutoFact: RecName: Full=Helicase SWR1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromatin remodeling complex subunit 2.257e-38
Internal
sp_v3.0_unigene74863 SustainPine v3.0 268
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene76542 SustainPine v3.0 264
• AutoFact: HAT 3.1 [Arabidopsis thaliana] 1.0e-24
• FL-Next: sp=Homeobox protein HAT3.1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene76619 SustainPine v3.0 321
• AutoFact: RAD26-like SNF2 family DNA-dependent ATPase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7Q2_LACBS 1.0e-24
• FL-Next: tr=GAGA-binding transcriptional activator; Pinus taeda (Loblolly pine). 0.0
• Sma3: SNF2 super family 3.206e-32
Putative C-terminus
sp_v3.0_unigene77193 SustainPine v3.0 153
• AutoFact: Unassigned protein
• FL-Next: Isoform 2 of Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME 0.0
• Sma3: Repressor of silencing 1 1.284e-08
Internal
sp_v3.0_unigene78426 SustainPine v3.0 102
• AutoFact: Chromatin remodeling complex subunit n=3 Tax=Populus trichocarpa RepID=B9HM77_POPTR 7.0e-08
• FL-Next: tr=Chromatin remodeling complex subunit; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene79023 SustainPine v3.0 356
• AutoFact: sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] gb|AED95551.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] 1.0e-35
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain