Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal

Term: IPR011629  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene9521 SustainPine v3.0 2121
AutoFact: cobW multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene10038 SustainPine v3.0 1985
AutoFact: plastid transcriptionally active 17 protein [Arabidopsis thaliana] gb|AAF27129.1|AC018849_17 hypothetical protein; 58060-60358 [Arabidopsis thaliana] gb|AAT47799.1| At1g80480 [Arabidopsis thaliana] gb|AAU05519.1| At1g80480 [Arabidopsis thaliana] gb|AEE364 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21197 SustainPine v3.0 3063
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FZD1.1|PPR58_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g26460, mitochondrial; Flags: Precursor gb|AAF98572.1|AC013427_15 Contains similarity to a hypothetical 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g26460, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene24391 SustainPine v3.0 1680
AutoFact: Cobalamin biosynthesis CobW-like protein [Arabidopsis thaliana] gb|AAY34160.1| At1g26520 [Arabidopsis thaliana] gb|AEE30700.1| Cobalamin biosynthesis CobW-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene24961 SustainPine v3.0 2589
AutoFact: leucine-rich repeat-containing protein [Arabidopsis thaliana] gb|AAN13089.1| unknown protein [Arabidopsis thaliana] gb|AEE29355.1| leucine-rich repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Regulatory subunit 1.214e-09
Complete
sp_v3.0_unigene72912 SustainPine v3.0 148
AutoFact: Prli-interacting factor l, putative n=1 Tax=Ricinus communis RepID=B9RVD0_RICCO 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene73799 SustainPine v3.0 445
AutoFact: PREDICTED: similar to COBW domain containing protein [Ornithorhynchus anatinus] 7.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene77788 SustainPine v3.0 415
AutoFact: Cobalamin biosynthesis protein CobW n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=E0LRU0_SPHCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ABC transporter multi drug resistance-like protein 7.31e-06
Internal
sp_v3.0_unigene142632 SustainPine v3.0 473
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FZD1.1|PPR58_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g26460, mitochondrial; Flags: Precursor gb|AAF98572.1|AC013427_15 Contains similarity to a hypothetical 4.0e-39
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g26460, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene166309 SustainPine v3.0 483
AutoFact: leucine-rich repeat-containing protein [Arabidopsis thaliana] gb|AAN13089.1| unknown protein [Arabidopsis thaliana] gb|AEE29355.1| leucine-rich repeat-containing protein [Arabidopsis thaliana] 9.0e-21
FL-Next: tr=Regulatory subunit; Zea mays (Maize). 0.0
Sma3: Regulatory subunit 6.056e-10
Internal
sp_v3.0_unigene166972 SustainPine v3.0 438
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FZD1.1|PPR58_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g26460, mitochondrial; Flags: Precursor gb|AAF98572.1|AC013427_15 Contains similarity to a hypothetical 8.40779e-45
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g26460, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain