Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA polymerase Rpb7, N-terminal

Term: IPR005576  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1025 SustainPine v3.0 1716
AutoFact: DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative n=1 Tax=Ricinus communis RepID=B9S9D8_RICCO 7.0e-38
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Complete
sp_v3.0_unigene4630 SustainPine v3.0 270
AutoFact: S-adenosyl methionine synthetase 2 (Fragment) n=10 Tax=Pinaceae RepID=Q5EK82_PINTA 1.0e-27
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 1.326e-21
Putative C-terminus
sp_v3.0_unigene4705 SustainPine v3.0 1204
AutoFact: S-adenosylmethionine synthase 3 n=6 Tax=Embryophyta RepID=METK3_ARATH 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 2.202e-35
C-terminus
sp_v3.0_unigene4912 SustainPine v3.0 1122
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methionine S-adenosyl transferase 1.285e-35
C-terminus
sp_v3.0_unigene6776 SustainPine v3.0 1846
AutoFact: DNA-directed RNA polymerase [Arabidopsis thaliana] ref|NP_974148.1| DNA-directed RNA polymerase [Arabidopsis thaliana] gb|AAN12946.1| unknown protein [Arabidopsis thaliana] gb|AEE35743.1| DNA-directed RNA polymerase [Arabidopsis thaliana] gb|AEE35744.1| D 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene7430 SustainPine v3.0 1183
AutoFact: RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] gb|AAF63141.1|AC011001_11 hypothetical protein [Arabidopsis thaliana] gb|AAL38764.1| putative RNA polymerase [Arabidopsis thaliana] gb|AAN13199.1| putative RNA polymerase [Ara 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Complete
sp_v3.0_unigene7641 SustainPine v3.0 2381
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 2.552e-26
C-terminus
sp_v3.0_unigene9328 SustainPine v3.0 1868
AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Putative RNA polymerase II subunit 5 0.0
Complete
sp_v3.0_unigene19303 SustainPine v3.0 478
AutoFact: RNA polymerase Rpb7 N-terminal domain-containing protein [Arabidopsis thaliana] gb|AAF63141.1|AC011001_11 hypothetical protein [Arabidopsis thaliana] gb|AAL38764.1| putative RNA polymerase [Arabidopsis thaliana] gb|AAN13199.1| putative RNA polymerase [Ara 3.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene19634 SustainPine v3.0 425
AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 2.0e-07
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
N-terminus
sp_v3.0_unigene21639 SustainPine v3.0 1223
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase 2; Vitis vinifera (Grape). 0.0
Sma3: Methionine S-adenosyl transferase 2.367e-35
Putative Complete
sp_v3.0_unigene21649 SustainPine v3.0 601
AutoFact: S-adenosylmethionine synthase 3 n=6 Tax=Embryophyta RepID=METK3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 2.323e-37
C-terminus
sp_v3.0_unigene21885 SustainPine v3.0 303
AutoFact: putative receptor-like protein kinase [Oryza sativa Japonica Group] gb|ABF99613.1| Protein kinase domain containing protein, expressed [Oryza sativa Japonica Group] gb|EAZ29106.1| hypothetical protein OsJ_13163 [Oryza sativa Japonica Group] 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 1.655e-26
Internal
sp_v3.0_unigene26198 SustainPine v3.0 303
AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 4.0e-24
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: RNA polymerase II subunit B7 1.214e-09
N-terminus
sp_v3.0_unigene31304 SustainPine v3.0 335
AutoFact: DNA-directed RNA polymerase II subunit rpb7 n=1 Tax=Dictyostelium discoideum RepID=RPB7_DICDI 1.0e-27
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: RNA polymerase II subunit B7 2.544e-09
C-terminus
sp_v3.0_unigene32932 SustainPine v3.0 710
AutoFact: DNA-directed RNA polymerase [Arabidopsis thaliana] ref|NP_974148.1| DNA-directed RNA polymerase [Arabidopsis thaliana] gb|AAN12946.1| unknown protein [Arabidopsis thaliana] gb|AEE35743.1| DNA-directed RNA polymerase [Arabidopsis thaliana] gb|AEE35744.1| D 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Putative N-terminus
sp_v3.0_unigene36409 SustainPine v3.0 534
AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 3.0e-07
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
N-terminus
sp_v3.0_unigene36604 SustainPine v3.0 419
AutoFact: DNA-directed RNA polymerase n=4 Tax=Arabidopsis RepID=Q8H1F8_ARATH 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene40806 SustainPine v3.0 2346
AutoFact: Lectin-like receptor kinase 7;3 n=1 Tax=Medicago truncatula RepID=Q6UY58_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative receptor-type protein kinase LRK1 2.202e-26
Putative C-terminus
sp_v3.0_unigene51404 SustainPine v3.0 841
AutoFact: S-adenosylmethionine synthase 1 n=12 Tax=Spermatophyta RepID=METK1_HORVU 0.0
FL-Next: sp=S-adenosylmethionine synthase 3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: S-adenosylmethionine synthetase 3.752e-31
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain