Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Excinuclease ABC, C subunit, N-terminal

Term: IPR000305  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene107010 SustainPine v3.0 266
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene110224 SustainPine v3.0 440
AutoFact: Unassigned protein
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene116527 SustainPine v3.0 758
AutoFact: DNA mismatch repair protein n=3 Tax=Arabidopsis RepID=Q84LK0_ARATH 0.0
FL-Next: sp=DNA mismatch repair protein MSH1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: DNA mismatch repair protein 4.076e-22
Internal
sp_v3.0_unigene126108 SustainPine v3.0 393
AutoFact: 2-oxoglutarate dehydrogenase, E1 subunit [Arabidopsis thaliana] 3.0e-37
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: 2-oxoglutarate dehydrogenase, E1 subunit 7.149e-09
Internal
sp_v3.0_unigene148563 SustainPine v3.0 274
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene152947 SustainPine v3.0 525
AutoFact: UvrABC system protein B n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z7U7_9GAMM 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Exinuclease ABC subunits B and C-containing protein 4.289e-10
Putative C-terminus
sp_v3.0_unigene159570 SustainPine v3.0 166
AutoFact: serine/threonine-protein kinase-like protein [Arabidopsis thaliana] sp|Q9SV05.1|CCR35_ARATH RecName: Full=Serine/threonine-protein kinase-like protein At3g51990; AltName: Full=CRINKLY 4-related kinase; Flags: Precursor emb|CAB41319.1| putative serine/thre 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein kinase APK1B, chloroplast, putative 1.812e-06
Internal
sp_v3.0_unigene162608 SustainPine v3.0 281
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Disease resistance protein (TIR-NBS-LRR class), putative 6.606e-08
Internal
sp_v3.0_unigene179165 SustainPine v3.0 406
AutoFact: GIY-YIG endonuclease [Fusarium oxysporum] 6.99949e-42
putative_coding
sp_v3.0_unigene183400 SustainPine v3.0 286
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g30350 1.114e-09
Putative N-terminus
sp_v3.0_unigene189799 SustainPine v3.0 254
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene200256 SustainPine v3.0 466
AutoFact: Oxoglutarate dehydrogenase n=1 Tax=Polysphondylium pallidum RepID=D3BJ15_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein ALNC14_047460; Albugo laibachii Nc14. 0.0
Sma3: 2-oxoglutarate dehydrogenase, putative 7.399e-09
Putative C-terminus
sp_v3.0_unigene208106 SustainPine v3.0 166
AutoFact: Unassigned protein 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain