Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene150944 SustainPine v3.0 438
• AutoFact: PREDICTED: similar to Eukaryotic initiation factor 4A-II n=1 Tax=Hydra magnipapillata RepID=UPI0001925CB9 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 4.553e-14
C-terminus
sp_v3.0_unigene151048 SustainPine v3.0 316
• AutoFact: H+-translocating pyrophosphatase family n=1 Tax=Micromonas sp. RCC299 RepID=C1E1R2_MICSR 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: H+-translocating pyrophosphatase family 5.942e-15
C-terminus
sp_v3.0_unigene151917 SustainPine v3.0 485
• AutoFact: DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MT79_PHYIT 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 5.252e-14
C-terminus
sp_v3.0_unigene152282 SustainPine v3.0 420
• AutoFact: DEAD box helicase n=1 Tax=Ectocarpus siliculosus RepID=D8LJE9_ECTSI 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 3.009e-10
C-terminus
sp_v3.0_unigene152285 SustainPine v3.0 289
• AutoFact: Centrin, putative n=12 Tax=Trypanosomatidae RepID=Q4DQ49_TRYCR 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Centrin 1.727e-18
Putative N-terminus
sp_v3.0_unigene152906 SustainPine v3.0 413
• AutoFact: Putative DEAD/DEAH box helicase n=1 Tax=Trichinella spiralis RepID=E5SYL4_TRISP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 21 1.116e-07
C-terminus
sp_v3.0_unigene153490 SustainPine v3.0 370
• AutoFact: ATP-dependent RNA helicase, putative n=2 Tax=Trichocomaceae RepID=B8MG36_TALSN 6.0e-37
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 51; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene153528 SustainPine v3.0 499
• AutoFact: DEAD-box ATP-dependent RNA helicase 49 [Arabidopsis thaliana] sp|Q8GXD6.2|RH49_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 49 gb|AAG51820.1|AC016163_9 putative ATP-dependent RNA helicase; 76692-78838 [Arabidopsis thaliana] gb|AEE35194.1| DEAD- 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 18 8.71e-09
Internal
sp_v3.0_unigene153646 SustainPine v3.0 253
• AutoFact: Pyrophosphate-energized vacuolar membrane proton pump, putative n=2 Tax=Phytophthora infestans RepID=D0N394_PHYIT 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: H+-translocating pyrophosphatase family 4.203e-15
Putative C-terminus
sp_v3.0_unigene154254 SustainPine v3.0 281
• AutoFact: DEAD/DEAH box helicase domain protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FH88_FLAJ1 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 6.818e-11
Internal
sp_v3.0_unigene154255 SustainPine v3.0 414
• AutoFact: V-type H(+)-translocating pyrophosphatase [Algoriphagus sp. PR1] gb|EAZ80839.1| V-type H(+)-translocating pyrophosphatase [Algoriphagus sp. PR1] 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pyrophosphate-energized vacuolar membrane proton pump 2.117e-16
Internal
sp_v3.0_unigene154432 SustainPine v3.0 265
• AutoFact: Caltractin ICL1e n=4 Tax=Paramecium tetraurelia RepID=CATR5_PARTE 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Centrin 4.507e-15
C-terminus
sp_v3.0_unigene154437 SustainPine v3.0 508
• AutoFact: DEAD box ATP-dependent RNA helicase n=1 Tax=Culex quinquefasciatus RepID=B0XJH6_CULQU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.058e-11
C-terminus
sp_v3.0_unigene154979 SustainPine v3.0 455
• AutoFact: membrane-bound proton-translocating pyrophosphatase [Thermoanaerobacter pseudethanolicus ATCC 33223] ref|YP_003476562.1| V-type H(+)-translocating pyrophosphatase [Thermoanaerobacter italicus Ab9] ref|YP_004186567.1| V-type H(+)-translocating pyrophosphat 6.02558e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Proton-translocating inorganic pyrophosphatase 2.028e-39
Internal
sp_v3.0_unigene155009 SustainPine v3.0 406
• AutoFact: Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family n=2 Tax=Pichia pastoris RepID=C4QV56_PICPG 5.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene155183 SustainPine v3.0 550
• AutoFact: PREDICTED: chaperonin containing Tcp1, subunit 5 (epsilon)-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBB48D 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 1.521e-11
C-terminus
sp_v3.0_unigene155574 SustainPine v3.0 341
• AutoFact: PREDICTED: eukaryotic translation initiation factor 4A-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBC21A 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Dead box ATP-dependent RNA helicase, putative 1.736e-11
C-terminus
sp_v3.0_unigene155728 SustainPine v3.0 326
• AutoFact: Chaperonin-containing TCP-1 epsilon subunit (Fragment) n=1 Tax=Bigelowiella natans RepID=Q7XBP0_BIGNA 9.80909e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: T-complex protein 1 subunit epsilon 1.483e-11
Internal
sp_v3.0_unigene155759 SustainPine v3.0 322
• AutoFact: N-terminal acetyltransferase ARD1 n=1 Tax=Capsaspora owczarzaki ATCC 30864 RepID=E9C294_9EUKA 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Silencing group B protein 1.508e-11
Putative N-terminus
sp_v3.0_unigene155802 SustainPine v3.0 456
• AutoFact: ATP-dependent RNA helicase DBP3 n=1 Tax=Gibberella zeae PH-1 RepID=DBP3_GIBZE 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 5 2.364e-08
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain