Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: RNA helicase, ATP-dependent, DEAD-box, conserved site

Term: IPR000629  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene103683 SustainPine v3.0 335
• AutoFact: DEAD-box ATP-dependent RNA helicase 37 n=2 Tax=Oryza sativa Japonica Group RepID=RH37_ORYSJ 8.00001e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 37 3.659e-08
Internal
sp_v3.0_unigene104770 SustainPine v3.0 703
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene104989 SustainPine v3.0 298
• AutoFact: subtilisin-like protease [Triticum aestivum] 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Subtilisin-like protease 3.641e-29
Internal
sp_v3.0_unigene105043 SustainPine v3.0 230
• AutoFact: cytochrome P450 86B1 [Arabidopsis thaliana] gb|AAM97029.1| cytochrome P450-like protein [Arabidopsis thaliana] gb|AAN15497.1| cytochrome P450-like protein [Arabidopsis thaliana] dbj|BAE99010.1| cytochrome P450 like protein [Arabidopsis thaliana] gb|AED912 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cytochrome P450, putative 3.375e-09
Internal
sp_v3.0_unigene106738 SustainPine v3.0 301
• AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 22 7.0e-31
• FL-Next: Isoform 2 of DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica GN=Os09g0383400 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 22 2.166e-09
Internal
sp_v3.0_unigene106889 SustainPine v3.0 336
• AutoFact: ATP-dependent RNA helicase like protein [Arabidopsis thaliana] emb|CAB78627.1| ATP-dependent RNA helicase like protein [Arabidopsis thaliana] 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 1 6.773e-09
N-terminus
sp_v3.0_unigene107460 SustainPine v3.0 417
• AutoFact: mitochondrial intermediate peptidase [Arabidopsis thaliana] gb|AED96095.1| mitochondrial intermediate peptidase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene107672 SustainPine v3.0 477
• AutoFact: Cytochrome P450 n=1 Tax=Populus trichocarpa RepID=B9IHM1_POPTR 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative cytochrome P450-dependent fatty acid hydroxylase 2.192e-12
N-terminus
sp_v3.0_unigene108238 SustainPine v3.0 222
• AutoFact: OSJNBa0011L07.15 protein n=5 Tax=Oryza sativa RepID=Q7XR86_ORYSJ 4.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Trihelix transcription factor 6.693e-08
Internal
sp_v3.0_unigene111453 SustainPine v3.0 210
• AutoFact: Probable DEAD-box ATP-dependent RNA helicase 48 n=3 Tax=Arabidopsis RepID=RH48_ARATH 2.0e-09
• FL-Next: sp=Probable DEAD-box ATP-dependent RNA helicase 48; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene112364 SustainPine v3.0 284
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 24 3.506e-09
Putative C-terminus
sp_v3.0_unigene112912 SustainPine v3.0 538
• AutoFact: Gag-pol polyprotein, putative [Solanum demissum] 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.144e-11
Putative C-terminus
sp_v3.0_unigene116395 SustainPine v3.0 299
• AutoFact: DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana] sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24 gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana] gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidop 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 24 3.506e-09
Internal
sp_v3.0_unigene118361 SustainPine v3.0 332
• AutoFact: RecName: Full=ATP-dependent RNA helicase DBP2 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 30 3.715e-08
Putative C-terminus
sp_v3.0_unigene120094 SustainPine v3.0 359
• AutoFact: DUF1777 multi-domain protein 2.0e-15
coding
sp_v3.0_unigene120191 SustainPine v3.0 375
• AutoFact: Peptidase_S8 domain containing protein 7.0e-05
• FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: Xylem serine proteinase 1, putative 1.698e-30
Internal
sp_v3.0_unigene123324 SustainPine v3.0 439
• AutoFact: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Fragment) n=3 Tax=Vitis RepID=E6Y5B3_9ROSI 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2.76e-20
Internal
sp_v3.0_unigene123985 SustainPine v3.0 226
• AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S033_RICCO 3.0e-22
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase 50; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 50 3.449e-09
Internal
sp_v3.0_unigene125368 SustainPine v3.0 278
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene125952 SustainPine v3.0 237
• AutoFact: DEAD-box ATP-dependent RNA helicase 22 n=3 Tax=Oryza sativa RepID=RH22_ORYSJ 1.0e-18
• FL-Next: Isoform 2 of DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica GN=Os09g0383400 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 22 1.736e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain