Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Cold shock protein

Term: IPR011129  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene190190 SustainPine v3.0 397
AutoFact: GRP multi-domain protein 2.0e-11
Sma3: Putative glycine rich protein 6.261e-22
coding
sp_v3.0_unigene190436 SustainPine v3.0 553
AutoFact: Proteasome subunit (Fragment) n=1 Tax=Griffithsia japonica RepID=Q7XYA9_GRIJA 0.0
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type-6 1.042e-07
N-terminus
sp_v3.0_unigene190483 SustainPine v3.0 473
AutoFact: Cold shock protein n=1 Tax=Bermanella marisrubri RepID=Q1N1Z0_9GAMM 7.0e-18
FL-Next: tr=Cold shock domain containing proteins, putative; Ricinus communis (Castor bean). 0.0
Sma3: Glycine-rich protein 2b 2.893e-08
Complete
sp_v3.0_unigene191603 SustainPine v3.0 425
AutoFact: Proteasome subunit beta type n=5 Tax=Euteleostei RepID=B5X8Y8_SALSA 2.0e-19
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type-6 6.012e-08
N-terminus
sp_v3.0_unigene200447 SustainPine v3.0 344
AutoFact: Proteasome subunit beta type n=1 Tax=Chlorella variabilis RepID=E1Z8Y2_9CHLO 2.0e-38
FL-Next: sp=Proteasome subunit beta type; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Proteasome subunit beta type-6 4.947e-08
C-terminus
sp_v3.0_unigene205666 SustainPine v3.0 431
AutoFact: GRP multi-domain protein 3.0e-14
Sma3: Putative glycine rich protein 1.101e-24
coding
sp_v3.0_unigene207769 SustainPine v3.0 581
AutoFact: Putative glycine-rich protein n=1 Tax=Picea glauca RepID=Q3HRT2_PICGL 1.0e-13
FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Cold shock domain protein 3 2.275e-08
C-terminus
sp_v3.0_unigene209306 SustainPine v3.0 473
AutoFact: Trypan_PARP multi-domain protein 4.0e-17
Sma3: Putative glycine rich protein 5.722e-25
coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain