Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene37208 SustainPine v3.0 912
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative Complete
sp_v3.0_unigene37254 SustainPine v3.0 660
AutoFact: Putative brassinosteroid insensitive 1-associated receptor kinase 1 n=5 Tax=Poaceae RepID=Q5VQL9_ORYSJ 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 8.664e-20
Internal
sp_v3.0_unigene37454 SustainPine v3.0 752
AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 0.0
FL-Next: tr=Myosin class 11-1; Adiantum capillus-veneris (Maidenhair fern). 0.0
Sma3: Myosin XI, putative 3.053e-19
Internal
sp_v3.0_unigene37893 SustainPine v3.0 2680
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene37897 SustainPine v3.0 1309
AutoFact: Alpha-tubulin n=3 Tax=Foraminifera RepID=Q26233_RETFI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 7.507e-29
N-terminus
sp_v3.0_unigene38625 SustainPine v3.0 638
AutoFact: Multicopper oxidase, type 1 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multicopper oxidase, putative 1.333e-40
N-terminus
sp_v3.0_unigene38626 SustainPine v3.0 2141
AutoFact: Multicopper oxidase, putative n=1 Tax=Ricinus communis RepID=B9SR02_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multicopper oxidase, putative 3.432e-40
Complete
sp_v3.0_unigene38629 SustainPine v3.0 2388
AutoFact: Multicopper oxidase, type 1 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multicopper oxidase, putative 3.632e-40
Complete
sp_v3.0_unigene38631 SustainPine v3.0 649
AutoFact: pfam07731, Cu-oxidase_2, Multicopper oxidase 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multicopper oxidase, putative 1.64e-40
C-terminus
sp_v3.0_unigene38632 SustainPine v3.0 672
AutoFact: Multicopper oxidase, putative n=1 Tax=Ricinus communis RepID=B9SR02_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multicopper oxidase, putative 3.537e-36
C-terminus
sp_v3.0_unigene38677 SustainPine v3.0 440
AutoFact: DUF868 domain containing protein 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene38748 SustainPine v3.0 1859
AutoFact: paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] sp|Q9LFQ3.2|SNL2_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 2 gb|AED92105.1| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 5.589e-16
Putative Complete
sp_v3.0_unigene38771 SustainPine v3.0 338
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 2.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Reverse transcriptase 9.659e-06
Putative N-terminus
sp_v3.0_unigene39151 SustainPine v3.0 346
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative C-terminus
sp_v3.0_unigene39275 SustainPine v3.0 396
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 9.484e-17
C-terminus
sp_v3.0_unigene40669 SustainPine v3.0 979
AutoFact: GTP-binding family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: GTP binding protein, putative 1.515e-07
Complete
sp_v3.0_unigene41037 SustainPine v3.0 339
AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 2.0e-28
FL-Next: tr=Myosin class 11-1; Adiantum capillus-veneris (Maidenhair fern). 0.0
Sma3: Myosin XI, putative 7.453e-20
Internal
sp_v3.0_unigene41472 SustainPine v3.0 157
AutoFact: myosin heavy chain class XI E3 protein, putative [Oryza sativa Japonica Group] 2.0e-19
FL-Next: tr=Uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Sma3: Myosin XI, putative 2.749e-23
Internal
sp_v3.0_unigene42301 SustainPine v3.0 630
AutoFact: rve domain containing protein 9.0e-24
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00750; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene42520 SustainPine v3.0 395
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HU88_POPTR 8.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 1.792e-12
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain