Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene34195 SustainPine v3.0 1153
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.784e-17
N-terminus
sp_v3.0_unigene34339 SustainPine v3.0 920
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TBB1_VOLCA Tubulin beta chain (ISS) 3.313e-08
Internal
sp_v3.0_unigene34443 SustainPine v3.0 484
• AutoFact: S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] ref|NP_001031144.1| S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] gb|AAK92706.1| unknown protein [Arabido 1.0e-34
• FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Internal
sp_v3.0_unigene34495 SustainPine v3.0 499
• AutoFact: NAC protein 1 n=2 Tax=Elaeis guineensis RepID=Q2XQF5_ELAGV 8.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein 1.87e-37
N-terminus
sp_v3.0_unigene34619 SustainPine v3.0 795
• AutoFact: 60S ribosomal protein L11-1 n=51 Tax=Embryophyta RepID=RL111_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L37 1.4013e-45
Putative Complete
sp_v3.0_unigene34876 SustainPine v3.0 1748
• AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
• FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalase 0.0
Complete
sp_v3.0_unigene35042 SustainPine v3.0 640
• AutoFact: myosin XI [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Myosin XI, putative 4.511e-23
Internal
sp_v3.0_unigene35051 SustainPine v3.0 487
• AutoFact: DUF868 domain containing protein 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene35052 SustainPine v3.0 1973
• AutoFact: RecName: Full=Cytochrome P450 720B2; AltName: Full=Cytochrome P450 CYPB gb|AAX07432.1| cytochrome P450 CYPB [Pinus taeda] 0.0
• FL-Next: tr=CYP720B2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene35102 SustainPine v3.0 3339
• AutoFact: vacuolar protein / peptidase dimerization domain-containing protein [Arabidopsis thaliana] dbj|BAE98701.1| 24 kDa vacuolar protein - like [Arabidopsis thaliana] gb|AED92872.1| vacuolar protein / peptidase dimerization domain-containing protein [Arabidopsi 0.0
• FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene35182 SustainPine v3.0 427
• AutoFact: myosin XI B [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Myosin XI B; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Myosin XI 2.536e-27
Internal
sp_v3.0_unigene35499 SustainPine v3.0 944
• AutoFact: Transferase, putative n=1 Tax=Ricinus communis RepID=B9RI53_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-1,6-xylosyltransferase 1.298e-18
C-terminus
sp_v3.0_unigene35513 SustainPine v3.0 1076
• AutoFact: Tubulin beta chain, putative n=2 Tax=Eukaryota RepID=B9S382_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta chain 4.899e-12
C-terminus
sp_v3.0_unigene35644 SustainPine v3.0 1720
• AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
• FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalase 0.0
Complete
sp_v3.0_unigene35881 SustainPine v3.0 2768
• AutoFact: protein TRF-like 6 [Arabidopsis thaliana] gb|AEE35355.1| protein TRF-like 6 [Arabidopsis thaliana] 0.0
• FL-Next: sp=Telomere repeat-binding protein 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene36386 SustainPine v3.0 694
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TBB1_VOLCA Tubulin beta chain (ISS) 2.689e-08
Internal
sp_v3.0_unigene36423 SustainPine v3.0 436
• AutoFact: Beta-tubulin (Fragment) n=6 Tax=Pseudotsuga RepID=C6FB34_PSEMZ 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 6.143e-12
C-terminus
sp_v3.0_unigene36455 SustainPine v3.0 1172
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 2.177e-15
N-terminus
sp_v3.0_unigene36969 SustainPine v3.0 2729
• AutoFact: xyloglucan 6-xylosyltransferase [Arabidopsis thaliana] sp|Q9CA75.1|GT5_ARATH RecName: Full=Putative glycosyltransferase 5; Short=AtGT5 gb|AAG52374.1|AC011765_26 putative alpha galactosyltransferase; 16168-17541 [Arabidopsis thaliana] gb|AAM13174.1| putati 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-1,6-xylosyltransferase 1.461e-18
Complete
sp_v3.0_unigene37012 SustainPine v3.0 3164
• AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 1.021e-17
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain