Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene28339 SustainPine v3.0 958
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_89.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SMT7_VITVI 0.0
FL-Next: sp=Reticuline oxidase-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Reticuline oxidase, putative 3.063e-30
Putative C-terminus
sp_v3.0_unigene28568 SustainPine v3.0 353
AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 1.0e-28
FL-Next: tr=Myosin class 11-1; Adiantum capillus-veneris (Maidenhair fern). 0.0
Sma3: Myosin XI, putative 5.167e-20
Internal
sp_v3.0_unigene28970 SustainPine v3.0 1051
AutoFact: ferredoxin-like protein [Arabidopsis thaliana] dbj|BAC42294.1| unknown protein [Arabidopsis thaliana] gb|AEE27397.1| ferredoxin-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene29179 SustainPine v3.0 642
AutoFact: protein phosphatase 2C homolog [Mesembryanthemum crystallinum] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 2.625e-16
N-terminus
sp_v3.0_unigene29270 SustainPine v3.0 579
AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 5.289e-10
C-terminus
sp_v3.0_unigene29525 SustainPine v3.0 2756
AutoFact: Stachyose synthase, putative n=1 Tax=Ricinus communis RepID=B9SXA4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed imbibition protein 6.806e-15
Complete
sp_v3.0_unigene29550 SustainPine v3.0 950
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene29770 SustainPine v3.0 1052
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HLV3_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 1.62e-16
Putative Complete
sp_v3.0_unigene29816 SustainPine v3.0 1534
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene30802 SustainPine v3.0 653
AutoFact: ribosomal protein L11, putative [Toxoplasma gondii ME49] gb|EEA97088.1| ribosomal protein L11, putative [Toxoplasma gondii ME49] gb|EEE25534.1| ribosomal protein L11, putative [Toxoplasma gondii GT1] gb|EEE32699.1| ribosomal protein L11, putative [Toxopla 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L11 3.151e-11
Complete
sp_v3.0_unigene30901 SustainPine v3.0 606
AutoFact: 60S ribosomal protein L11 (Fragment) n=2 Tax=Ixodoidea RepID=A6NA04_ORNPR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L11 2.963e-11
Complete
sp_v3.0_unigene31128 SustainPine v3.0 373
AutoFact: NAM-like protein [Prunus persica] 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein 4.2039e-45
N-terminus
sp_v3.0_unigene31946 SustainPine v3.0 420
AutoFact: 60S ribosomal protein L11 (Fragment) n=2 Tax=Ixodoidea RepID=A6NA04_ORNPR 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L11 3.151e-11
N-terminus
sp_v3.0_unigene32070 SustainPine v3.0 567
AutoFact: NAC domain protein, IPR003441 n=1 Tax=Populus trichocarpa RepID=B9N2P7_POPTR 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 2.435e-11
N-terminus
sp_v3.0_unigene32266 SustainPine v3.0 1077
AutoFact: RecName: Full=Tubulin alpha-1 chain gb|AAA79910.1| alpha-tubulin [Pisum sativum] 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Sma3: Tubulin alpha-2 chain 1.35e-09
C-terminus
sp_v3.0_unigene32533 SustainPine v3.0 1435
AutoFact: Basic 7S globulin 2 small subunit, putative n=1 Tax=Ricinus communis RepID=B9RTU6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Basic 7S globulin 2 small subunit, putative 1.042e-18
Complete
sp_v3.0_unigene32710 SustainPine v3.0 771
AutoFact: Alpha-1,6-xylosyltransferase n=2 Tax=Pinaceae RepID=Q5TIN4_PINTA 0.0
FL-Next: tr=Alpha-1,6-xylosyltransferase; Pinus taeda (Loblolly pine). 0.0
Sma3: Alpha-1,6-xylosyltransferase 2.15e-19
C-terminus
sp_v3.0_unigene32738 SustainPine v3.0 612
AutoFact: 60S ribosomal protein L11 n=1 Tax=Lepeophtheirus salmonis RepID=D3PJJ3_9MAXI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribosomal protein L11 2.963e-11
Complete
sp_v3.0_unigene34073 SustainPine v3.0 1881
AutoFact: Tubulin beta-2/beta-3 chain n=340 Tax=Eukaryota RepID=TBB2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr2 scaffold_105, whole genome shotgun sequence 0.0
Complete
sp_v3.0_unigene34100 SustainPine v3.0 1392
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 3.334e-26
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain