Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene10491 SustainPine v3.0 1284
AutoFact: ribonuclease H2 subunit B [Xenopus laevis] sp|Q5HZP1.1|RNH2B_XENLA RecName: Full=Ribonuclease H2 subunit B; Short=RNase H2 subunit B; AltName: Full=Ribonuclease HI subunit B gb|AAH88940.1| LOC496343 protein [Xenopus laevis] 9.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene10883 SustainPine v3.0 3392
AutoFact: putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis thaliana] gb|AAL90901.1| AT5g20250/F5O24_140 [Arabidopsis thaliana] gb|AAN18198.1| At5g20250/F5O24_140 [Arabidopsis thaliana] dbj|BAE99252.1| seed imbitition protein-like [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed imbibition protein 7.083e-15
Complete
sp_v3.0_unigene10998 SustainPine v3.0 1698
AutoFact: Somatic embryogenesis receptor-like kinase 1 n=2 Tax=Coniferales RepID=D1MEH6_9CONI 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 3.985e-18
C-terminus
sp_v3.0_unigene11006 SustainPine v3.0 2048
AutoFact: exosome complex component RRP4 [Arabidopsis thaliana] gb|AAC72108.1| Similar to hypothetical protein SPAC2F7.14c gi|1052797 from Schizosaccharomyces pombe cosmid gb|Z50142 [Arabidopsis thaliana] gb|AAQ65156.1| At1g03360 [Arabidopsis thaliana] dbj|BAD43995 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene11011 SustainPine v3.0 987
AutoFact: Phosphatidic acid phosphatase, putative n=1 Tax=Ricinus communis RepID=B9SQ05_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphatidic acid phosphatase, putative 4.274e-12
N-terminus
sp_v3.0_unigene11702 SustainPine v3.0 1417
AutoFact: Basic 7S globulin 2 small subunit, putative n=1 Tax=Ricinus communis RepID=B9RTU6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Basic 7S globulin 2 small subunit, putative 1.024e-14
Complete
sp_v3.0_unigene12121 SustainPine v3.0 1365
AutoFact: putative receptor-like kinase (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF98430.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed [Oryza sativa Japonica Group] gb|ABF98431.1| BRASSINOSTEROID I 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 6.484e-18
C-terminus
sp_v3.0_unigene12170 SustainPine v3.0 1182
AutoFact: NAM-like protein [Arabidopsis thaliana] gb|AAN15611.1| NAM-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein 1.287e-39
Complete
sp_v3.0_unigene12304 SustainPine v3.0 1840
AutoFact: Multicopper oxidase, type 1 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multicopper oxidase, putative 3.132e-40
C-terminus
sp_v3.0_unigene12405 SustainPine v3.0 2282
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Putative uncharacterized protein F16J13.140 1.501e-09
Complete
sp_v3.0_unigene13805 SustainPine v3.0 671
AutoFact: Somatic embryogenesis receptor kinase-like protein 3 n=1 Tax=Medicago truncatula RepID=E2IXG7_MEDTR 8.99999e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 3.476e-16
N-terminus
sp_v3.0_unigene14009 SustainPine v3.0 746
AutoFact: Heavy metal ATPase n=1 Tax=Populus trichocarpa RepID=B9GWH1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heavy metal ATPase 1.374e-26
Internal
sp_v3.0_unigene14123 SustainPine v3.0 1838
AutoFact: NAM-like protein [Prunus persica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Putative Complete
sp_v3.0_unigene14173 SustainPine v3.0 714
AutoFact: NO APICAL MERISTEM2 n=2 Tax=Pisum sativum RepID=B8XS03_PEA 0.0
FL-Next: tr=Cup-shaped cotyledon; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene15086 SustainPine v3.0 1231
AutoFact: Copper P1B-ATPase n=2 Tax=Glycine max RepID=A7ISW5_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heavy metal ATPase 2.026e-11
C-terminus
sp_v3.0_unigene15349 SustainPine v3.0 444
AutoFact: pfam10644, Misat_Myo_SegII, Misato Segment II myosin-like domain 7.0e-22
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
N-terminus
sp_v3.0_unigene15640 SustainPine v3.0 3392
AutoFact: leucine-rich repeat receptor-like kinase [Ipomoea batatas] 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.323e-19
Complete
sp_v3.0_unigene15705 SustainPine v3.0 488
AutoFact: putative prefoldin subunit 2 [Arabidopsis thaliana] ref|NP_850626.1| putative prefoldin subunit 2 [Arabidopsis thaliana] sp|Q9LJ98.1|PFD2_ARATH RecName: Full=Probable prefoldin subunit 2 dbj|BAB01463.1| unnamed protein product [Arabidopsis thaliana] gb|AA 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene15843 SustainPine v3.0 868
AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9SXJ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2C 3.988e-14
Putative N-terminus
sp_v3.0_unigene15865 SustainPine v3.0 1866
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tubulin, beta chain 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain