Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene202735 SustainPine v3.0 696
• AutoFact: 60S ribosomal protein L11 n=3 Tax=Pleosporineae RepID=B2WFR3_PYRTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
Complete
sp_v3.0_unigene202860 SustainPine v3.0 544
• AutoFact: Alpha-tubulin n=1 Tax=Sterkiella histriomuscorum RepID=Q49I46_OXYTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.291e-12
C-terminus
sp_v3.0_unigene203033 SustainPine v3.0 352
• AutoFact: PREDICTED: tubulin beta-6 chain isoform 3 n=1 Tax=Pan troglodytes RepID=UPI00020E4624 3.0e-06
• FL-Next: tr=Beta-tubulin 2; Nicotiana tabacum (Common tobacco). 0.0
• Sma3: Beta-tubulin 1.798e-12
Complete
sp_v3.0_unigene203124 SustainPine v3.0 646
• AutoFact: 60S ribosomal protein L11, putative n=3 Tax=Chromadorea RepID=A8NKQ0_BRUMA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
Putative Complete
sp_v3.0_unigene203319 SustainPine v3.0 783
• AutoFact: Beta tubulin n=7 Tax=Eukaryota RepID=A8E074_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta chain 4.199e-12
C-terminus
sp_v3.0_unigene203705 SustainPine v3.0 468
• AutoFact: Beta-tubulin, putative n=3 Tax=Eukaryota RepID=C5KEN3_9ALVE 9.80909e-45
• FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: Beta-tubulin 2.879e-12
Complete
sp_v3.0_unigene204416 SustainPine v3.0 576
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 5.543e-19
C-terminus
sp_v3.0_unigene204473 SustainPine v3.0 517
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 1.97e-13
Putative Complete
sp_v3.0_unigene204547 SustainPine v3.0 491
• AutoFact: ribosomal protein L11, putative [Toxoplasma gondii ME49] gb|EEA97088.1| ribosomal protein L11, putative [Toxoplasma gondii ME49] gb|EEE25534.1| ribosomal protein L11, putative [Toxoplasma gondii GT1] gb|EEE32699.1| ribosomal protein L11, putative [Toxopla 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
N-terminus
sp_v3.0_unigene204592 SustainPine v3.0 387
• AutoFact: 60S ribosomal protein L11 n=4 Tax=Cryptosporidium RepID=Q5CX79_CRYPV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
Putative N-terminus
sp_v3.0_unigene204609 SustainPine v3.0 456
• AutoFact: 60S ribosomal protein L11 n=4 Tax=sordariomyceta RepID=A6S5F3_BOTFB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
C-terminus
sp_v3.0_unigene204727 SustainPine v3.0 602
• AutoFact: 60S ribosomal protein L11 n=2 Tax=Tetrahymena thermophila RepID=RL11_TETTH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
Putative Complete
sp_v3.0_unigene204769 SustainPine v3.0 345
• AutoFact: Cytosolic large ribosomal subunit L11 (Fragment) n=1 Tax=Pfiesteria piscicida RepID=A3E3U1_PFIPI 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.151e-11
N-terminus
sp_v3.0_unigene205541 SustainPine v3.0 466
• AutoFact: Putative 60S ribosomal protein RPL11 n=1 Tax=Phoronis muelleri RepID=B2YI33_9BILA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
Putative C-terminus
sp_v3.0_unigene205798 SustainPine v3.0 645
• AutoFact: putative receptor-like kinase (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF98430.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed [Oryza sativa Japonica Group] gb|ABF98431.1| BRASSINOSTEROID I 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 3.632e-15
C-terminus
sp_v3.0_unigene207918 SustainPine v3.0 364
• AutoFact: putative S-locus protein kinase [Arabidopsis thaliana] sp|O64776.2|Y1144_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g61440; Flags: Precursor gb|AEE33838.1| putative S-locus protein kinase [Arabidopsis thaliana] 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene208095 SustainPine v3.0 180
• AutoFact: RecName: Full=40S ribosomal protein S3a; AltName: Full=Protein cyc07 dbj|BAA89498.1| cyc07 [Daucus carota] 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 3.897e-25
Internal
sp_v3.0_unigene208371 SustainPine v3.0 125
• AutoFact: Tubulin beta 4 chain (Fragment) n=14 Tax=Magnoliophyta RepID=Q6LAB6_ARATH 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin 9.332e-07
Internal
sp_v3.0_unigene208448 SustainPine v3.0 1086
• AutoFact: putative receptor-like kinase (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF98430.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed [Oryza sativa Japonica Group] gb|ABF98431.1| BRASSINOSTEROID I 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 1.732e-19
C-terminus
sp_v3.0_unigene208526 SustainPine v3.0 797
• AutoFact: Mei2-like protein (Fragment) n=1 Tax=Pinus taeda RepID=Q6J741_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AML1 1.234e-25
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain