Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene6639 SustainPine v3.0 1780
AutoFact: tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana] dbj|BAB10956.1| unnamed protein product [Arabidopsis thaliana] gb|AAK83641.1| AT5g67220/K21H1_18 [Arabidopsis thaliana] gb|AAM26724.1| AT5g67220/K21H1_18 [Arabidopsis thaliana] gb|AED98315.1| tRNA-dihy 0.0
FL-Next: tr=Putative uncharacterized protein Sb10g029830; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Complete
sp_v3.0_unigene6824 SustainPine v3.0 2755
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 3.113e-18
Complete
sp_v3.0_unigene7405 SustainPine v3.0 3001
AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 1.064e-17
Complete
sp_v3.0_unigene7531 SustainPine v3.0 2027
AutoFact: phosphatidylserine synthase 2 [Arabidopsis thaliana] gb|AEE29265.1| phosphatidylserine synthase 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene7583 SustainPine v3.0 1150
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 8.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 5.66e-16
Putative Complete
sp_v3.0_unigene7679 SustainPine v3.0 1881
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CID11 3.492e-16
Complete
sp_v3.0_unigene7701 SustainPine v3.0 828
AutoFact: ferredoxin-like protein [Arabidopsis thaliana] dbj|BAC42294.1| unknown protein [Arabidopsis thaliana] gb|AEE27397.1| ferredoxin-like protein [Arabidopsis thaliana] 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene7748 SustainPine v3.0 2416
AutoFact: Multicopper oxidase, putative n=1 Tax=Ricinus communis RepID=B9RXJ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multicopper oxidase, putative 3.54999e-40
Complete
sp_v3.0_unigene7808 SustainPine v3.0 1999
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta tubulin 3 0.0
Complete
sp_v3.0_unigene8163 SustainPine v3.0 3593
AutoFact: MEI2-like protein 5 [Arabidopsis thaliana] ref|NP_849727.1| MEI2-like protein 5 [Arabidopsis thaliana] sp|Q8VWF5.1|AML5_ARATH RecName: Full=Protein MEI2-like 5; Short=AML5; AltName: Full=MEI2-like protein 5 gb|AAL32691.1| RNA-binding protein MEI2, putativ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AML1 4.215e-22
Complete
sp_v3.0_unigene9089 SustainPine v3.0 2424
AutoFact: No apical meristem-related protein n=1 Tax=Phoenix dactylifera RepID=F2WAC7_PHODC 0.0
FL-Next: tr=NAC-domain containing protein 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene9109 SustainPine v3.0 1045
AutoFact: DUF868 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene9122 SustainPine v3.0 2655
AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Myosin XI, putative 2.329e-12
Complete
sp_v3.0_unigene9133 SustainPine v3.0 1720
AutoFact: Cu2+-exporting ATPase [Arabidopsis thaliana] sp|Q9SH30.2|AHM7_ARATH RecName: Full=Putative copper-transporting ATPase 3 gb|ACF95837.1| heavy metal P-type ATPase [Arabidopsis thaliana] gb|ACF95838.1| heavy metal P-type ATPase [Arabidopsis thaliana] gb|ACF9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heavy metal ATPase 9.912e-21
C-terminus
sp_v3.0_unigene9626 SustainPine v3.0 1789
AutoFact: Galactomannan galactosyltransferase n=1 Tax=Senna occidentalis RepID=Q564G6_9FABA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-1,6-xylosyltransferase 1.371e-18
Complete
sp_v3.0_unigene9634 SustainPine v3.0 2421
AutoFact: leucine-rich repeat receptor-like kinase [Ipomoea batatas] 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.284e-19
Complete
sp_v3.0_unigene9897 SustainPine v3.0 1556
AutoFact: tobamovirus multiplication 1 homolog 3 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tobamovirus multiplication 3 1.045e-20
Complete
sp_v3.0_unigene9936 SustainPine v3.0 1828
AutoFact: putative protein phosphatase 2C 63 [Arabidopsis thaliana] sp|O81760.1|P2C63_ARATH RecName: Full=Probable protein phosphatase 2C 63; Short=AtPP2C63 gb|AAK50092.1|AF372953_1 AT4g33920/F17I5_110 [Arabidopsis thaliana] emb|CAA19874.1| putative protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Protein phosphatase 2c, putative 9.136e-18
Complete
sp_v3.0_unigene9945 SustainPine v3.0 3307
AutoFact: Raffinose_syn domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed imbibition protein 9.15e-15
Complete
sp_v3.0_unigene10311 SustainPine v3.0 1385
AutoFact: pfam02365, NAM, No apical meristem (NAM) protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain