Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene147702 SustainPine v3.0 535
• AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
• FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalase 0.0
C-terminus
sp_v3.0_unigene147703 SustainPine v3.0 590
• AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
• FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalase 0.0
Misassembled
sp_v3.0_unigene147956 SustainPine v3.0 379
• AutoFact: MatR n=7 Tax=Abies RepID=B9VLF2_ABISA 0.0
• FL-Next: tr=MatR; Abies nephrolepis. Mitochondrion. 0.0
• Sma3: Maturase 0.0
Putative C-terminus
sp_v3.0_unigene148857 SustainPine v3.0 321
• AutoFact: Phosphoinositide phosphatase family protein [Arabidopsis thaliana] gb|AAK91448.1| At3g14201 [Arabidopsis thaliana] gb|AAM16260.1| at3g14201/at3g14201 [Arabidopsis thaliana] gb|AAP49835.1| SAC domain protein 2 [Arabidopsis thaliana] gb|AEE75486.1| Phosphoi 6.0e-33
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Phosphoinositide 5-phosphatase, putative 2.911e-13
Internal
sp_v3.0_unigene149345 SustainPine v3.0 218
• AutoFact: F1L3.28 n=1 Tax=Arabidopsis thaliana RepID=Q9LNP7_ARATH 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Myosin XI 2.485e-27
Internal
sp_v3.0_unigene149675 SustainPine v3.0 110
• AutoFact: Maturase (Fragment) n=1 Tax=Pinus sp. Qiu 94013 RepID=Q9T671_9CONI 1.0e-11
• FL-Next: tr=MatR; Abies nephrolepis. Mitochondrion. 0.0
• Sma3: Maturase 0.0
Internal
sp_v3.0_unigene149723 SustainPine v3.0 315
• AutoFact: 60S ribosomal protein L5 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3JUJ9_PUCGT 2.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
C-terminus
sp_v3.0_unigene150101 SustainPine v3.0 216
• AutoFact: Tubulin alpha-1 chain n=5 Tax=Coelomata RepID=F4WDI4_9HYME 2.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 3.735e-12
Putative C-terminus
sp_v3.0_unigene150142 SustainPine v3.0 438
• AutoFact: Alpha tubulin (Fragment) n=1 Tax=Acanthamoeba polyphaga RepID=Q102R7_ACAPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.808e-20
Internal
sp_v3.0_unigene150353 SustainPine v3.0 288
• AutoFact: 40S ribosomal protein S3a n=2 Tax=Chlamydomonadales RepID=RS3A_CHLRE 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: 40S ribosomal protein S3a 3.295e-17
Putative C-terminus
sp_v3.0_unigene150446 SustainPine v3.0 435
• AutoFact: Tubulin beta-5 chain n=14 Tax=Eukaryota RepID=TBB5_ECTVR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 3.38e-12
C-terminus
sp_v3.0_unigene150570 SustainPine v3.0 476
• AutoFact: Tubulin beta chain n=125 Tax=Eukaryota RepID=TBB_PLAF7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 3.237e-12
C-terminus
sp_v3.0_unigene150571 SustainPine v3.0 463
• AutoFact: 60S ribosomal protein L11 n=7 Tax=Apocrita RepID=F4W748_9HYME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.151e-11
C-terminus
sp_v3.0_unigene150694 SustainPine v3.0 321
• AutoFact: 60S ribosomal protein L11a, putative n=2 Tax=Theileria RepID=Q4N8W2_THEPA 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.963e-11
Internal
sp_v3.0_unigene151029 SustainPine v3.0 486
• AutoFact: ribosomal protein L11-like protein [Solanum palustre] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
C-terminus
sp_v3.0_unigene151148 SustainPine v3.0 173
• AutoFact: AGAP011754-PA n=1 Tax=Anopheles gambiae RepID=Q5TMM2_ANOGA 7.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heavy metal ATPase 5.231e-09
Internal
sp_v3.0_unigene151155 SustainPine v3.0 340
• AutoFact: 60S ribosomal protein L11, putative n=1 Tax=Babesia bovis RepID=A7AQT8_BABBO 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 3.69e-11
C-terminus
sp_v3.0_unigene151328 SustainPine v3.0 355
• AutoFact: PREDICTED: similar to prefoldin 2 [Canis familiaris] 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene151403 SustainPine v3.0 443
• AutoFact: PREDICTED: tubulin beta-4 chain isoform 2 n=1 Tax=Pan troglodytes RepID=UPI00020E4596 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 2.481e-12
C-terminus
sp_v3.0_unigene151516 SustainPine v3.0 369
• AutoFact: Beta tubulin n=7 Tax=Eukaryota RepID=A8E074_9EUKA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta chain 3.895e-12
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain