Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene135633 SustainPine v3.0 564
• AutoFact: NAC protein 1 [Elaeis guineensis] gb|ABB72844.1| NAC protein 1 splice variant 2 [Elaeis guineensis] 7.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein 3.836e-16
Internal
sp_v3.0_unigene137104 SustainPine v3.0 503
• AutoFact: Multicopper oxidase, type 1 [Medicago truncatula] 3.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multicopper oxidase, putative 1.562e-40
Internal
sp_v3.0_unigene137282 SustainPine v3.0 214
• AutoFact: putative protein phosphatase 2C 63 [Arabidopsis thaliana] sp|O81760.1|P2C63_ARATH RecName: Full=Probable protein phosphatase 2C 63; Short=AtPP2C63 gb|AAK50092.1|AF372953_1 AT4g33920/F17I5_110 [Arabidopsis thaliana] emb|CAA19874.1| putative protein [Arabid 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 4.538e-14
Internal
sp_v3.0_unigene137293 SustainPine v3.0 222
• AutoFact: Beta-tubulin (Fragment) n=2 Tax=core eudicotyledons RepID=B3GQU8_CITMA 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 1.777e-08
Internal
sp_v3.0_unigene137386 SustainPine v3.0 210
• AutoFact: Tubulin alpha-2 chain n=20 Tax=Magnoliophyta RepID=TBA2_ORYSJ 2.0e-15
• FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
• Sma3: Alpha tubulin 5.684e-09
N-terminus
sp_v3.0_unigene137616 SustainPine v3.0 259
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 1.822e-06
Internal
sp_v3.0_unigene137752 SustainPine v3.0 406
• AutoFact: Carbohydrate oxidase n=1 Tax=Helianthus annuus RepID=Q8SA59_HELAN 1.0e-26
• FL-Next: sp=Reticuline oxidase; Papaver somniferum (Opium poppy). 0.0
• Sma3: Reticuline oxidase, putative 2.8026e-45
Internal
sp_v3.0_unigene138412 SustainPine v3.0 234
• AutoFact: Unassigned protein
unknown
sp_v3.0_unigene138421 SustainPine v3.0 266
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 1.85e-15
Putative N-terminus
sp_v3.0_unigene140374 SustainPine v3.0 1179
• AutoFact: alpha-tubulin [Eucalyptus grandis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 2.223e-14
Putative Complete
sp_v3.0_unigene140409 SustainPine v3.0 1168
• AutoFact: Somatic embryogenesis receptor-like kinase 1 n=2 Tax=Coniferales RepID=D1MEH6_9CONI 0.0
• FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 1.557e-20
C-terminus
sp_v3.0_unigene140594 SustainPine v3.0 840
• AutoFact: NAC domain containing protein 47 [Arabidopsis thaliana] gb|AAO64920.1| At3g04070 [Arabidopsis thaliana] dbj|BAE99421.1| NAM-like protein [Arabidopsis thaliana] gb|AEE74033.1| NAC domain containing protein 47 [Arabidopsis thaliana] 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein 7.521e-10
Putative C-terminus
sp_v3.0_unigene141041 SustainPine v3.0 423
• AutoFact: Multicopper oxidase, type 1 [Medicago truncatula] 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multicopper oxidase, putative 3.241e-26
N-terminus
sp_v3.0_unigene141224 SustainPine v3.0 308
• AutoFact: NAC domain protein, IPR003441 n=2 Tax=Populus trichocarpa RepID=B9GU14_POPTR 1.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein 2.359e-26
Internal
sp_v3.0_unigene141244 SustainPine v3.0 411
• AutoFact: Tubulin beta-3 chain (Fragment) n=1 Tax=Anemia phyllitidis RepID=TBB3_ANEPH 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin like protein 2.06e-08
Internal
sp_v3.0_unigene141273 SustainPine v3.0 559
• AutoFact: Multicopper oxidase, type 1 n=1 Tax=Medicago truncatula RepID=A2Q4H7_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multicopper oxidase, putative 3.279e-40
Internal
sp_v3.0_unigene141356 SustainPine v3.0 670
• AutoFact: PREDICTED: tubulin beta-8 chain-like n=2 Tax=Macaca mulatta RepID=UPI0001D55545 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 3.651e-08
N-terminus
sp_v3.0_unigene141396 SustainPine v3.0 578
• AutoFact: putative phosphaticid acid phosphatase [Musa acuminata AAA Group] 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphatidic acid phosphatase, putative 2.736e-12
N-terminus
sp_v3.0_unigene141590 SustainPine v3.0 316
• AutoFact: NAC domain transcription factor [Triticum aestivum] 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 5.817e-26
Internal
sp_v3.0_unigene141689 SustainPine v3.0 512
• AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 7.025e-17
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain