Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene127837 SustainPine v3.0 1369
AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha tubulin 2.167e-13
Putative Complete
sp_v3.0_unigene128603 SustainPine v3.0 271
AutoFact: Multicopper oxidase, type 1 n=1 Tax=Medicago truncatula RepID=A2Q4H7_MEDTR 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multicopper oxidase, putative 7.489e-37
Putative N-terminus
sp_v3.0_unigene128614 SustainPine v3.0 473
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S555_RICCO 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 1.076e-10
Putative N-terminus
sp_v3.0_unigene128735 SustainPine v3.0 623
AutoFact: Putative NAM (no apical meristem) protein [Oryza sativa Japonica Group] gb|ABF95729.1| NAC domain transcription factor, putative, expressed [Oryza sativa Japonica Group] dbj|BAH01634.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Putative N-terminus
sp_v3.0_unigene128805 SustainPine v3.0 430
AutoFact: Pectinesterase n=1 Tax=Annona cherimola RepID=C0L7D8_ANNCH 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multicopper oxidase, putative 1.543e-40
Internal
sp_v3.0_unigene129238 SustainPine v3.0 419
AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 6.35e-10
C-terminus
sp_v3.0_unigene129644 SustainPine v3.0 759
AutoFact: S-locus lectin protein kinase-like protein [Arabidopsis thaliana] sp|Q9SY95.1|Y1155_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g61550; Flags: Precursor gb|AAD25553.1|AC005850_10 Putative serine/threonine kinase [A 9.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr19 scaffold_4, whole genome shotgun sequence 2.494e-17
Internal
sp_v3.0_unigene129669 SustainPine v3.0 262
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CID11 1.239e-16
C-terminus
sp_v3.0_unigene129700 SustainPine v3.0 172
unknown
sp_v3.0_unigene129964 SustainPine v3.0 481
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CID11 2.888e-16
Internal
sp_v3.0_unigene130155 SustainPine v3.0 419
AutoFact: Unassigned protein
FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene130249 SustainPine v3.0 691
AutoFact: Serine/threonine-protein kinase PBS1, putative n=1 Tax=Ricinus communis RepID=B9SP66_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 7.893e-13
Internal
sp_v3.0_unigene130346 SustainPine v3.0 273
AutoFact: myosin-like protein [Arabidopsis thaliana] 1.0e-38
FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
Sma3: Myosin XI, putative 1.145e-15
Internal
sp_v3.0_unigene132158 SustainPine v3.0 517
AutoFact: pfam07731, Cu-oxidase_2, Multicopper oxidase 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multicopper oxidase, putative 1.84e-29
C-terminus
sp_v3.0_unigene132188 SustainPine v3.0 421
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_28.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CTU8_VITVI 2.0e-30
FL-Next: sp=Reticuline oxidase; Papaver somniferum (Opium poppy). 0.0
Sma3: Reticuline oxidase, putative 1.421e-15
Internal
sp_v3.0_unigene132897 SustainPine v3.0 248
AutoFact: Beta-tubulin (Fragment) n=1 Tax=Spinacia oleracea RepID=A3FMG7_SPIOL 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene133173 SustainPine v3.0 679
AutoFact: Tubulin alpha subunit n=11 Tax=Eukaryota RepID=B1NHW5_9EUKA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tubulin alpha-2 chain 1.525e-09
Putative Complete
sp_v3.0_unigene133365 SustainPine v3.0 374
AutoFact: Lipid phosphate phosphatase 2 [Arabidopsis thaliana] sp|Q9XI60.1|LPP2_ARATH RecName: Full=Lipid phosphate phosphatase 2; Short=AtLPP2; AltName: Full=Phosphatidic acid phosphatase 2; Short=AtPAP2; AltName: Full=Prenyl diphosphate phosphatase gb|AAD39637.1| 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phosphatidic acid phosphatase, putative 2.708e-12
Internal
sp_v3.0_unigene133847 SustainPine v3.0 501
AutoFact: putative copper-exporting ATPase [Sorghum bicolor] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copper-transporting atpase p-type, putative 5.629e-20
Putative C-terminus
sp_v3.0_unigene135185 SustainPine v3.0 271
AutoFact: RVT_1 domain containing protein 3.0e-10
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain