Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene113096 SustainPine v3.0 368
• AutoFact: NAM-like protein [Prunus persica] 3.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene113929 SustainPine v3.0 384
• AutoFact: Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9RQX7_RICCO 0.0
• FL-Next: tr=Myosin XI, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Myosin 2.969e-24
Internal
sp_v3.0_unigene115721 SustainPine v3.0 215
• AutoFact: NAC domain containing protein 2 [Arabidopsis thaliana] gb|AAF35417.1| putative jasmonic acid regulatory protein [Arabidopsis thaliana] dbj|BAB20600.1| AtNAC2 [Arabidopsis thaliana] dbj|BAB02380.1| jasmonic acid regulatory protein-like [Arabidopsis thalian 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein 8.43e-28
Putative N-terminus
sp_v3.0_unigene116340 SustainPine v3.0 287
• AutoFact: copper ion binding / oxidoreductase (EC:1.10.3.3) 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multicopper oxidase, putative 7.842e-13
Putative C-terminus
sp_v3.0_unigene117122 SustainPine v3.0 232
• AutoFact: NAC domain protein, IPR003441 n=1 Tax=Populus trichocarpa RepID=B9MTA7_POPTR 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein 2.958e-27
N-terminus
sp_v3.0_unigene117921 SustainPine v3.0 159
• AutoFact: Multicopper oxidase, type 1 n=1 Tax=Medicago truncatula RepID=A2Q4H7_MEDTR 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multicopper oxidase, putative 2.986e-39
Internal
sp_v3.0_unigene120305 SustainPine v3.0 407
• AutoFact: Reticuline oxidase n=1 Tax=Eschscholzia californica RepID=RETO_ESCCA 4.0e-36
• FL-Next: sp=Reticuline oxidase; Eschscholzia californica (California poppy). 0.0
• Sma3: Reticuline oxidase, putative 1.4013e-45
Internal
sp_v3.0_unigene121257 SustainPine v3.0 443
• AutoFact: receptor protein kinase, putative [Arabidopsis thaliana] 6.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_302, whole genome shotgun sequence 4.861e-11
Internal
sp_v3.0_unigene121966 SustainPine v3.0 393
• AutoFact: myosin-like protein [Arabidopsis thaliana] emb|CAB80037.1| myosin-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Myosin XI 1.439e-28
Internal
sp_v3.0_unigene123775 SustainPine v3.0 575
• AutoFact: putative protein phosphatase 2C 63 [Arabidopsis thaliana] sp|O81760.1|P2C63_ARATH RecName: Full=Probable protein phosphatase 2C 63; Short=AtPP2C63 gb|AAK50092.1|AF372953_1 AT4g33920/F17I5_110 [Arabidopsis thaliana] emb|CAA19874.1| putative protein [Arabid 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 2.101e-09
N-terminus
sp_v3.0_unigene124417 SustainPine v3.0 413
• AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 2.482e-18
N-terminus
sp_v3.0_unigene124745 SustainPine v3.0 306
• AutoFact: 40S ribosomal protein S3a n=5 Tax=Neoptera RepID=RS3A_BIPLU 8.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Cyc07 protein 1.397e-08
Putative C-terminus
sp_v3.0_unigene124749 SustainPine v3.0 163
• AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Myosin XI, putative 1.077e-15
Internal
sp_v3.0_unigene125116 SustainPine v3.0 437
• AutoFact: Polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q8W153_ORYSJ 9.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.351e-18
Putative N-terminus
sp_v3.0_unigene125373 SustainPine v3.0 168
• AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 4.0e-06
• FL-Next: tr=Myosin class 11-2; Adiantum capillus-veneris (Maidenhair fern). 0.0
• Sma3: Myosin XI, putative 2.932e-07
Internal
sp_v3.0_unigene126023 SustainPine v3.0 273
• AutoFact: unconventional myosin [Helianthus annuus] 7.0e-24
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Myosin XI, putative 1.855e-16
N-terminus
sp_v3.0_unigene126679 SustainPine v3.0 1765
• AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
• FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalase 0.0
Complete
sp_v3.0_unigene127281 SustainPine v3.0 812
• AutoFact: pfam05637, Glyco_transf_34, galactosyl transferase GMA12/MNN10 family 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-1,6-xylosyltransferase 1.045e-18
N-terminus
sp_v3.0_unigene127447 SustainPine v3.0 1317
• AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 7.18e-31
Putative Complete
sp_v3.0_unigene127530 SustainPine v3.0 1333
• AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.282e-14
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain