Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2863 SustainPine v3.0 3184
AutoFact: Heavy metal ATPase n=1 Tax=Populus trichocarpa RepID=B9GWH1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copper-transporting atpase p-type, putative 4.802e-20
C-terminus
sp_v3.0_unigene3248 SustainPine v3.0 2635
AutoFact: putative imbibition protein [Brassica oleracea] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed imbibition protein 6.192e-15
Complete
sp_v3.0_unigene3318 SustainPine v3.0 2048
AutoFact: Carbon catabolite repressor protein, putative n=1 Tax=Ricinus communis RepID=B9RMY1_RICCO 0.0
FL-Next: sp=Uncharacterized calcium-binding protein At1g02270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Carbon catabolite repressor protein, putative 9.178e-09
Complete
sp_v3.0_unigene3574 SustainPine v3.0 2304
AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 0.0
FL-Next: tr=Myosin class 11-1; Adiantum capillus-veneris (Maidenhair fern). 0.0
Sma3: Myosin XI, putative 3.083e-19
C-terminus
sp_v3.0_unigene4164 SustainPine v3.0 1460
AutoFact: NAC domain protein, IPR003441 n=1 Tax=Populus trichocarpa RepID=B9IJW7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene4262 SustainPine v3.0 1091
AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 5.393e-10
C-terminus
sp_v3.0_unigene4346 SustainPine v3.0 574
AutoFact: NAC domain containing protein 35 [Arabidopsis thaliana] gb|AAC78526.2| NAM (no apical meristem)-like protein [Arabidopsis thaliana] gb|AEC05582.1| NAC domain containing protein 35 [Arabidopsis thaliana] 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Putative N-terminus
sp_v3.0_unigene4351 SustainPine v3.0 460
AutoFact: NAC transcription factor NAM-1 [Hordeum vulgare subsp. vulgare] gb|ABY67949.1| NAM-1 [Hordeum vulgare subsp. vulgare] 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein 1.961e-37
N-terminus
sp_v3.0_unigene4821 SustainPine v3.0 1598
AutoFact: EDGP (Fragment) n=1 Tax=Daucus carota RepID=Q05929_DAUCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Basic 7S globulin 2 small subunit, putative 5.915e-15
Complete
sp_v3.0_unigene5046 SustainPine v3.0 850
AutoFact: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative n=1 Tax=Ricinus communis RepID=B9SHD1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 1.712e-21
Putative Complete
sp_v3.0_unigene5054 SustainPine v3.0 3611
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative histone deacetylase complex, SIN3 component 1.006e-16
C-terminus
sp_v3.0_unigene5152 SustainPine v3.0 4317
AutoFact: PB1 domain-containing protein tyrosine kinase [Arabidopsis thaliana] gb|AEE27735.1| PB1 domain-containing protein tyrosine kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Serine/threonine protein kinase, putative 3.364e-18
Complete
sp_v3.0_unigene5718 SustainPine v3.0 1344
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene5779 SustainPine v3.0 2673
AutoFact: diacylglycerol kinase1 [Arabidopsis thaliana] sp|Q39017.2|DGK1_ARATH RecName: Full=Diacylglycerol kinase 1; Short=DAG kinase 1; AltName: Full=Diglyceride kinase 1; Short=DGK 1 emb|CAB62604.1| diacylglycerol kinase (ATDGK1) [Arabidopsis thaliana] dbj|BAB09 0.0
FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Diacylglycerol kinase 2.095e-10
C-terminus
sp_v3.0_unigene5824 SustainPine v3.0 1381
AutoFact: Heavy metal ATPase n=1 Tax=Populus trichocarpa RepID=B9GWH1_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heavy metal ATPase 1.137e-23
C-terminus
sp_v3.0_unigene5897 SustainPine v3.0 3762
AutoFact: RNA-binding protein MEI2, putative; 36123-32976 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AML1 7.558e-26
Complete
sp_v3.0_unigene6143 SustainPine v3.0 1103
AutoFact: putative S-locus protein kinase [Arabidopsis thaliana] sp|O64776.2|Y1144_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g61440; Flags: Precursor gb|AEE33838.1| putative S-locus protein kinase [Arabidopsis thaliana] 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene6385 SustainPine v3.0 2380
AutoFact: DUF588 multi-domain protein 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6522 SustainPine v3.0 1957
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RZ39_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene6582 SustainPine v3.0 1424
AutoFact: DUF588 multi-domain protein 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain