Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene95964 SustainPine v3.0 692
• AutoFact: Copper-transporting atpase p-type, putative n=1 Tax=Ricinus communis RepID=B9RC99_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heavy metal ATPase 1.04e-17
Internal
sp_v3.0_unigene96260 SustainPine v3.0 1054
• AutoFact: Putative copper-transporting ATPase 3 n=13 Tax=Camelineae RepID=AHM7_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heavy metal ATPase 2.189e-23
C-terminus
sp_v3.0_unigene96611 SustainPine v3.0 1209
• AutoFact: Tubulin alpha-2 chain n=20 Tax=Magnoliophyta RepID=TBA2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 3.404e-19
C-terminus
sp_v3.0_unigene96752 SustainPine v3.0 1692
• AutoFact: pfam02365, NAM, No apical meristem (NAM) protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 2.47401e-40
Complete
sp_v3.0_unigene97424 SustainPine v3.0 828
• AutoFact: Receptor protein kinase, putative [Solanum bulbocastanum] 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr19 scaffold_4, whole genome shotgun sequence 3.672e-18
Internal
sp_v3.0_unigene97529 SustainPine v3.0 1409
• AutoFact: exosome complex component RRP4 [Arabidopsis thaliana] gb|AAC72108.1| Similar to hypothetical protein SPAC2F7.14c gi|1052797 from Schizosaccharomyces pombe cosmid gb|Z50142 [Arabidopsis thaliana] gb|AAQ65156.1| At1g03360 [Arabidopsis thaliana] dbj|BAD43995 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene97724 SustainPine v3.0 243
• AutoFact: DUF868 domain containing protein 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene98588 SustainPine v3.0 533
• AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9T632_RICCO 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 3.045e-15
Internal
sp_v3.0_unigene98788 SustainPine v3.0 651
• AutoFact: putative imbibition protein homolog [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Stachyose synthase, putative 3.88e-15
N-terminus
sp_v3.0_unigene99144 SustainPine v3.0 395
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: RNA-binding protein, putative 2.016e-10
Internal
sp_v3.0_unigene99174 SustainPine v3.0 1058
• AutoFact: Tubulin beta-2/beta-3 chain n=340 Tax=Eukaryota RepID=TBB2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta chain 5.596e-12
C-terminus
sp_v3.0_unigene99594 SustainPine v3.0 429
• AutoFact: Alpha-tubulin n=1 Tax=Sterkiella histriomuscorum RepID=Q49I46_OXYTR 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.834e-28
N-terminus
sp_v3.0_unigene99828 SustainPine v3.0 984
• AutoFact: diacylglycerol kinase [Arabidopsis thaliana] 0.0
• FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Diacylglycerol kinase 1, putative, expressed 1.657e-08
C-terminus
sp_v3.0_unigene100078 SustainPine v3.0 593
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene100293 SustainPine v3.0 353
• AutoFact: putative receptor protein kinase [Oryza sativa Japonica Group] 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: S-locus-specific glycoprotein S6, putative 7.332e-13
Internal
sp_v3.0_unigene101289 SustainPine v3.0 933
• AutoFact: copper-transporting ATPase RAN1 [Arabidopsis thaliana] sp|Q9S7J8.1|AHM5_ARATH RecName: Full=Copper-transporting ATPase RAN1; AltName: Full=Protein RESPONSIVE TO ANTAGONIST 1 gb|AAD29109.1|AF082565_1 ATP dependent copper transporter [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heavy metal ATPase 4.838e-15
Internal
sp_v3.0_unigene101388 SustainPine v3.0 829
• AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 0.0
• FL-Next: tr=Myosin XI; Marchantia polymorpha (Liverwort) (Marchantia aquatica). 0.0
• Sma3: Myosin XI, putative 1.647e-19
Internal
sp_v3.0_unigene101488 SustainPine v3.0 1442
• AutoFact: NAC protein 1 [Elaeis guineensis] gb|ABB72844.1| NAC protein 1 splice variant 2 [Elaeis guineensis] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Complete
sp_v3.0_unigene101595 SustainPine v3.0 512
• AutoFact: Os04g0658700 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0J9E3_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative Receptor-like serine/threonine kinase(RFK1) 1.772e-12
Internal
sp_v3.0_unigene101874 SustainPine v3.0 346
• AutoFact: DIL domain containing protein 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Myosin XI, putative 3.949e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain