Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene80247 SustainPine v3.0 269
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Capsellina sp. ATCC 50039 RepID=E2CWH4_9EUKA 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.454e-22
Internal
sp_v3.0_unigene80253 SustainPine v3.0 292
• AutoFact: Myosin subfamily XI heavy chain n=1 Tax=Petroselinum crispum RepID=Q9ATB7_PETCR 3.0e-15
• FL-Next: tr=Myosin subfamily XI heavy chain; Petroselinum crispum (Parsley) (Petroselinum hortense). 0.0
• Sma3: Myosin XI, putative 2.53e-16
Internal
sp_v3.0_unigene80354 SustainPine v3.0 220
• AutoFact: Catalase n=1 Tax=Schizophyllum commune H4-8 RepID=D8PTL6_SCHCM 3.0e-32
• FL-Next: sp=Catalase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Catalase 0.0
Internal
sp_v3.0_unigene80415 SustainPine v3.0 174
• AutoFact: Tubulin beta-1 chain n=24 Tax=Agaricomycetes RepID=TBB1_SUIBO 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta chain 4.745e-12
C-terminus
sp_v3.0_unigene80835 SustainPine v3.0 347
• AutoFact: 60S ribosomal protein l11 (Fragment) n=3 Tax=Magnoliophyta RepID=E5GC34_CUCME 5.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.667e-11
C-terminus
sp_v3.0_unigene81101 SustainPine v3.0 108
• AutoFact: protein serine/threonine kinase-like protein [Arabidopsis thaliana] 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 4.765e-06
Internal
sp_v3.0_unigene81198 SustainPine v3.0 210
• AutoFact: L11 n=1 Tax=Suberites domuncula RepID=Q4KTH5_SUBDO 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Ribosomal protein L11 2.391e-11
Putative C-terminus
sp_v3.0_unigene81287 SustainPine v3.0 252
• AutoFact: Heavy metal translocating P-type ATPase n=2 Tax=Acidovorax RepID=A1W200_ACISJ 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heavy metal ATPase 1.583e-23
Internal
sp_v3.0_unigene81515 SustainPine v3.0 239
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Zea mays RepID=Q9LKY5_MAIZE 7.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 2.017e-22
Internal
sp_v3.0_unigene90984 SustainPine v3.0 212
putative_coding
sp_v3.0_unigene93565 SustainPine v3.0 2128
• AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CID11 3.854e-16
Complete
sp_v3.0_unigene93591 SustainPine v3.0 1416
• AutoFact: Strong similarity to F22O13.22 gi|3063460 myosin homolog from A. thaliana BAC gb|AC003981 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Uncharacterized protein; Zea mays (Maize). 0.0
• Sma3: Myosin XI, putative 2.423e-19
Putative Complete
sp_v3.0_unigene93816 SustainPine v3.0 1542
• AutoFact: MEI2-like protein 4 [Arabidopsis thaliana] sp|Q9LYN7.1|AML4_ARATH RecName: Full=Protein MEI2-like 4; Short=AML4; AltName: Full=MEI2-like protein 4 emb|CAB87285.1| Mei2-like protein [Arabidopsis thaliana] dbj|BAE99028.1| Mei2-like protein [Arabidopsis thal 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AML1 9.596e-26
C-terminus
sp_v3.0_unigene93933 SustainPine v3.0 1572
• AutoFact: leucine-rich repeat receptor-like kinase [Ipomoea batatas] 0.0
• FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 5.628e-18
C-terminus
sp_v3.0_unigene93995 SustainPine v3.0 1220
• AutoFact: DUF868 domain containing protein 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene94340 SustainPine v3.0 785
• AutoFact: Receptor protein kinase, putative [Solanum bulbocastanum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr19 scaffold_4, whole genome shotgun sequence 1.966e-15
Internal
sp_v3.0_unigene94344 SustainPine v3.0 1353
• AutoFact: Myosin XI, putative n=1 Tax=Ricinus communis RepID=B9S596_RICCO 0.0
• FL-Next: tr=Myosin XI, putative; Ricinus communis (Castor bean). 0.0
• Sma3: Myosin XI 5.192e-27
Internal
sp_v3.0_unigene94710 SustainPine v3.0 594
• AutoFact: myosin heavy chain class XI E3 protein, putative [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Sma3: Myosin XI, putative 1.09e-19
Internal
sp_v3.0_unigene94742 SustainPine v3.0 254
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Basic 7S globulin 2 small subunit, putative 1.458e-26
C-terminus
sp_v3.0_unigene95330 SustainPine v3.0 455
• AutoFact: NAM [Petunia x hybrida] emb|CAA63102.2| NAM [Petunia x hybrida] 0.0
• FL-Next: tr=Cup-shaped cotyledon; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Sma3: NAC domain protein, IPR003441 1.1911e-43
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain