Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene71560 SustainPine v3.0 278
AutoFact: RVT_1 domain containing protein 5.0e-09
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Sma3: Reverse transcriptase 5.4e-06
Putative C-terminus
sp_v3.0_unigene72072 SustainPine v3.0 267
AutoFact: NAC domain containing protein 2 [Arabidopsis thaliana] gb|AAF35417.1| putative jasmonic acid regulatory protein [Arabidopsis thaliana] dbj|BAB20600.1| AtNAC2 [Arabidopsis thaliana] dbj|BAB02380.1| jasmonic acid regulatory protein-like [Arabidopsis thalian 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: NAC domain protein, IPR003441 3.39114e-43
N-terminus
sp_v3.0_unigene72074 SustainPine v3.0 360
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene72143 SustainPine v3.0 341
AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 5.0e-31
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
N-terminus
sp_v3.0_unigene72305 SustainPine v3.0 229
AutoFact: protein terminal ear1 [Zea mays] sp|O65001.1|TE1_MAIZE RecName: Full=Protein terminal ear1 gb|AAK29419.1|AF348319_1 TERMINAL EAR1 [Zea mays] gb|AAC39463.1| terminal ear1 [Zea mays] 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: AML1 1.007e-17
Internal
sp_v3.0_unigene72344 SustainPine v3.0 193
AutoFact: Cu2+-exporting ATPase [Arabidopsis thaliana] sp|Q9SH30.2|AHM7_ARATH RecName: Full=Putative copper-transporting ATPase 3 gb|ACF95837.1| heavy metal P-type ATPase [Arabidopsis thaliana] gb|ACF95838.1| heavy metal P-type ATPase [Arabidopsis thaliana] gb|ACF9 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heavy metal ATPase 4.034e-18
Putative C-terminus
sp_v3.0_unigene72653 SustainPine v3.0 309
AutoFact: putative receptor-like kinase (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF98430.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed [Oryza sativa Japonica Group] gb|ABF98431.1| BRASSINOSTEROID I 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Leucine-rich repeat receptor-like protein kinase 2.711e-07
C-terminus
sp_v3.0_unigene72807 SustainPine v3.0 269
AutoFact: Multicopper oxidase, putative n=1 Tax=Ricinus communis RepID=B9SR02_RICCO 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multicopper oxidase, putative 2.985e-36
Internal
sp_v3.0_unigene72897 SustainPine v3.0 207
AutoFact: pfam07731, Cu-oxidase_2, Multicopper oxidase 9.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multicopper oxidase, putative 5.031e-19
Internal
sp_v3.0_unigene73037 SustainPine v3.0 250
AutoFact: Multicopper oxidase, putative n=1 Tax=Ricinus communis RepID=B9SBL2_RICCO 5.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Multicopper oxidase, putative 1.034e-19
Putative C-terminus
sp_v3.0_unigene73577 SustainPine v3.0 266
AutoFact: Diacylglycerol kinase, theta, putative n=1 Tax=Ricinus communis RepID=B9RLR5_RICCO 2.0e-27
FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Diacylglycerol kinase 1, putative, expressed 1.571e-08
Internal
sp_v3.0_unigene74090 SustainPine v3.0 419
AutoFact: adenine nucleotide alpha hydrolases-domain containing protein kinase [Arabidopsis thaliana] gb|AAL57632.1| At1g21590/F24J8_9 [Arabidopsis thaliana] gb|AAM98263.1| At1g21590/F24J8_9 [Arabidopsis thaliana] gb|AEE30121.1| adenine nucleotide alpha hydrolases- 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 1.872e-15
Putative C-terminus
sp_v3.0_unigene74309 SustainPine v3.0 229
AutoFact: unconventional myosin [Helianthus annuus] 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Myosin XI, putative 1.097e-12
Internal
sp_v3.0_unigene74715 SustainPine v3.0 447
AutoFact: Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Polysphondylium pallidum RepID=D3BUA7_POLPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Methylmalonate-semialdehyde dehydrogenase, putative 1.027e-12
Internal
sp_v3.0_unigene74859 SustainPine v3.0 303
AutoFact: tubulin alpha-2/alpha-4 chain [Arabidopsis thaliana] 8.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha-tubulin 5.15e-26
N-terminus
sp_v3.0_unigene74904 SustainPine v3.0 459
AutoFact: TBB1_VOLCA Tubulin beta chain (ISS) (Fragment) n=27 Tax=Eukaryota RepID=Q01G07_OSTTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Beta tubulin 1.125e-12
Internal
sp_v3.0_unigene74999 SustainPine v3.0 338
AutoFact: DUF868 domain containing protein 6.99949e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene75563 SustainPine v3.0 247
AutoFact: Hydrolase, hydrolyzing O-glycosyl compounds, putative n=1 Tax=Ricinus communis RepID=B9T139_RICCO 6.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Seed imbibition protein 3.159e-11
Putative N-terminus
sp_v3.0_unigene75575 SustainPine v3.0 253
AutoFact: Tubulin alpha-1A chain n=6 Tax=Agaricales RepID=TBAA_SCHCO 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Alpha tubulin 1.214e-35
Internal
sp_v3.0_unigene75807 SustainPine v3.0 375
AutoFact: cysteine-rich receptor-like protein kinase 2 [Arabidopsis thaliana] sp|Q9CAL3.1|CRK2_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 2; Short=Cysteine-rich RLK2; Flags: Precursor gb|AAG52471.1|AC010796_10 putative protein kinase; 37247-3480 5.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 4.022e-15
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain