Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene66406 SustainPine v3.0 191
• AutoFact: Multicopper oxidase, type 1 [Medicago truncatula] 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multicopper oxidase, putative 1.41699e-40
Internal
sp_v3.0_unigene66538 SustainPine v3.0 216
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene66608 SustainPine v3.0 425
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 2.0e-33
• FL-Next: tr=Integrase; subsp. trichocarpa). 0.0
• Sma3: Reverse transcriptase 3.148e-12
Internal
sp_v3.0_unigene67229 SustainPine v3.0 293
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 6.0e-27
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 5.22e-09
Putative N-terminus
sp_v3.0_unigene67538 SustainPine v3.0 387
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene68177 SustainPine v3.0 213
• AutoFact: copper-transporting ATPase RAN1 [Arabidopsis thaliana] sp|Q9S7J8.1|AHM5_ARATH RecName: Full=Copper-transporting ATPase RAN1; AltName: Full=Protein RESPONSIVE TO ANTAGONIST 1 gb|AAD29109.1|AF082565_1 ATP dependent copper transporter [Arabidopsis thaliana] 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heavy metal ATPase 9.776e-16
Internal
sp_v3.0_unigene68627 SustainPine v3.0 227
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Basic 7S globulin 2 small subunit, putative 8.728e-19
C-terminus
sp_v3.0_unigene68650 SustainPine v3.0 366
• AutoFact: multicopper oxidase, putative (EC:1.10.3.3) 5.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative PS60 4.296e-09
Internal
sp_v3.0_unigene69061 SustainPine v3.0 201
• AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T754_RICCO 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: AML1 7.071e-26
Internal
sp_v3.0_unigene69189 SustainPine v3.0 186
• AutoFact: Multicopper oxidase, putative n=1 Tax=Ricinus communis RepID=B9SR02_RICCO 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multicopper oxidase, putative 9.439e-16
Internal
sp_v3.0_unigene69400 SustainPine v3.0 290
• AutoFact: Multicopper oxidase, putative n=1 Tax=Ricinus communis RepID=B9SR02_RICCO 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multicopper oxidase, putative 6.37e-29
Putative C-terminus
sp_v3.0_unigene69870 SustainPine v3.0 454
• AutoFact: NAC domain containing protein 35 [Arabidopsis thaliana] gb|AAC78526.2| NAM (no apical meristem)-like protein [Arabidopsis thaliana] gb|AEC05582.1| NAC domain containing protein 35 [Arabidopsis thaliana] 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene70034 SustainPine v3.0 357
• AutoFact: cysteine-rich receptor-like protein kinase 2 [Arabidopsis thaliana] sp|Q9CAL3.1|CRK2_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 2; Short=Cysteine-rich RLK2; Flags: Precursor gb|AAG52471.1|AC010796_10 putative protein kinase; 37247-3480 5.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr19 scaffold_4, whole genome shotgun sequence 5.347e-18
Internal
sp_v3.0_unigene70219 SustainPine v3.0 416
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene70394 SustainPine v3.0 198
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin like protein 3.208e-08
Internal
sp_v3.0_unigene70485 SustainPine v3.0 241
• AutoFact: Multicopper oxidase, putative n=1 Tax=Ricinus communis RepID=B9SMP3_RICCO 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multicopper oxidase, putative 1.23801e-40
Internal
sp_v3.0_unigene70659 SustainPine v3.0 353
• AutoFact: Integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCD0_POPTR 5.0e-25
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 3.172e-10
Putative C-terminus
sp_v3.0_unigene70692 SustainPine v3.0 166
• AutoFact: pfam07731, Cu-oxidase_2, Multicopper oxidase 6.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multicopper oxidase, putative 8.533e-19
Internal
sp_v3.0_unigene70823 SustainPine v3.0 299
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-tubulin 2.188e-13
N-terminus
sp_v3.0_unigene71126 SustainPine v3.0 318
• AutoFact: RVT_1 domain containing protein 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain