Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene61224 SustainPine v3.0 278
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Internal
sp_v3.0_unigene61960 SustainPine v3.0 190
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 8.0e-12
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Internal
sp_v3.0_unigene62618 SustainPine v3.0 254
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Carbon catabolite repressor protein, putative 6.229e-09
Internal
sp_v3.0_unigene62801 SustainPine v3.0 323
• AutoFact: Unassigned protein
• FL-Next: tr=Integrase; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene63695 SustainPine v3.0 232
• AutoFact: Phosphatidylserine synthase I-like n=3 Tax=Oryza sativa RepID=Q5N8Q3_ORYSJ 2.0e-09
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene64112 SustainPine v3.0 201
• AutoFact: Catalase n=4 Tax=Pinaceae RepID=B1PYP2_PINSY 1.0e-24
• FL-Next: sp=Catalase; Pinus sylvestris (Scots pine). 0.0
• Sma3: Catalase 0.0
Internal
sp_v3.0_unigene64278 SustainPine v3.0 181
• AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9SXJ0_RICCO 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Protein phosphatase 2c, putative 2.19e-15
N-terminus
sp_v3.0_unigene64852 SustainPine v3.0 172
• AutoFact: cysteine-rich receptor-like protein kinase 13 [Arabidopsis thaliana] sp|Q0PW40.1|CRK13_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 13; Short=Cysteine-rich RLK13; Flags: Precursor gb|ABG74916.1| cysteine-rich receptor-like kinase 13 [Ara 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative serine/threonine kinase protein 1.873e-14
Internal
sp_v3.0_unigene64955 SustainPine v3.0 274
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 5.792e-27
Internal
sp_v3.0_unigene65229 SustainPine v3.0 243
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 5.0e-21
• FL-Next: tr=F7F22.17, putative; Asparagus officinalis (Garden asparagus). 0.0
Internal
sp_v3.0_unigene65245 SustainPine v3.0 267
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 4.0e-20
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Integrase 3.664e-09
Putative C-terminus
sp_v3.0_unigene65548 SustainPine v3.0 313
• AutoFact: alpha tubulin-2A [Triticum aestivum] gb|ABD92931.1| alpha tubulin-2D [Triticum aestivum] gb|ABD92932.1| alpha tubulin-2B [Triticum aestivum] 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 2.675e-16
Internal
sp_v3.0_unigene65647 SustainPine v3.0 148
• AutoFact: Alpha-1,6-xylosyltransferase n=2 Tax=Pinaceae RepID=Q5TIN4_PINTA 7.0e-18
• FL-Next: tr=Alpha-1,6-xylosyltransferase; Pinus taeda (Loblolly pine). 0.0
• Sma3: Alpha-1,6-xylosyltransferase 3.176e-12
Internal
sp_v3.0_unigene65716 SustainPine v3.0 211
• AutoFact: RecName: Full=Catalase isozyme 2 emb|CAA85425.1| catalase [Nicotiana plumbaginifolia] 8.0e-22
• FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Catalase 0.0
Internal
sp_v3.0_unigene65789 SustainPine v3.0 169
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: CID11 1.407e-16
Putative C-terminus
sp_v3.0_unigene65806 SustainPine v3.0 185
• AutoFact: beta-tubulin [Eucalyptus grandis] 7.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene65841 SustainPine v3.0 319
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta-4-tubulin 4.008e-07
Internal
sp_v3.0_unigene66040 SustainPine v3.0 361
• AutoFact: ribonuclease H2 subunit B [Gallus gallus] emb|CAG31884.1| hypothetical protein RCJMB04_13a19 [Gallus gallus] 4.0e-08
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Sma3: cDNA clone:J033082I06, full insert sequence 8.772e-06
Internal
sp_v3.0_unigene66311 SustainPine v3.0 409
• AutoFact: F7F22.17 n=2 Tax=Arabidopsis thaliana RepID=Q9SHM3_ARATH 2.0e-30
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
C-terminus
sp_v3.0_unigene66312 SustainPine v3.0 198
• AutoFact: copper-transporting ATPase RAN1 [Arabidopsis thaliana] sp|Q9S7J8.1|AHM5_ARATH RecName: Full=Copper-transporting ATPase RAN1; AltName: Full=Protein RESPONSIVE TO ANTAGONIST 1 gb|AAD29109.1|AF082565_1 ATP dependent copper transporter [Arabidopsis thaliana] 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heavy metal ATPase 7.894e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain