Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene57438 SustainPine v3.0 471
• AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 1.135e-28
N-terminus
sp_v3.0_unigene57688 SustainPine v3.0 186
• AutoFact: Beta-tubulin (Fragment) n=2 Tax=core eudicotyledons RepID=B3GQU8_CITMA 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta chain 7.927e-10
Internal
sp_v3.0_unigene57789 SustainPine v3.0 340
• AutoFact: Somatic embryogenesis receptor kinase 2 n=2 Tax=core eudicotyledons RepID=E5D6S9_9ERIC 2.0e-39
• FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
• Sma3: Leucine-rich repeat receptor-like protein kinase 9.776e-14
Internal
sp_v3.0_unigene57990 SustainPine v3.0 495
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 5.0e-39
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 2.207e-08
Putative Complete
sp_v3.0_unigene58365 SustainPine v3.0 409
• AutoFact: Alpha tubulin (Fragment) n=9 Tax=Eukaryota RepID=Q5UMY4_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 9.459e-29
Putative Complete
sp_v3.0_unigene58533 SustainPine v3.0 162
• AutoFact: beta-tubulin [Eucalyptus grandis] 9.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin beta-7 chain 1.121e-07
Internal
sp_v3.0_unigene58661 SustainPine v3.0 468
• AutoFact: Lipid phosphate phosphatase 2 n=2 Tax=Arabidopsis RepID=LPP2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphatidic acid phosphatase, putative 4.084e-12
Internal
sp_v3.0_unigene58741 SustainPine v3.0 165
• AutoFact: Tubulin beta 8 chain (Fragment) n=1 Tax=Oryza sativa Indica Group RepID=A6MZI9_ORYSI 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene58996 SustainPine v3.0 275
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 2.0e-21
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene59043 SustainPine v3.0 298
• AutoFact: exosome complex component RRP4 [Arabidopsis thaliana] gb|AAC72108.1| Similar to hypothetical protein SPAC2F7.14c gi|1052797 from Schizosaccharomyces pombe cosmid gb|Z50142 [Arabidopsis thaliana] gb|AAQ65156.1| At1g03360 [Arabidopsis thaliana] dbj|BAD43995 7.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene59358 SustainPine v3.0 263
• AutoFact: tubulin alpha-3 chain [Oryza sativa Indica Group] 4.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 2.51e-16
Internal
sp_v3.0_unigene59372 SustainPine v3.0 241
• AutoFact: putative prefoldin subunit 2 [Arabidopsis thaliana] ref|NP_850626.1| putative prefoldin subunit 2 [Arabidopsis thaliana] sp|Q9LJ98.1|PFD2_ARATH RecName: Full=Probable prefoldin subunit 2 dbj|BAB01463.1| unnamed protein product [Arabidopsis thaliana] gb|AA 4.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene59450 SustainPine v3.0 316
• AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Zea mays RepID=Q9LKY5_MAIZE 4.99997e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 9.002e-25
Internal
sp_v3.0_unigene59539 SustainPine v3.0 246
• AutoFact: Multicopper oxidase, type 1 n=1 Tax=Medicago truncatula RepID=A2Q4H7_MEDTR 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multicopper oxidase, putative 6.021e-24
Internal
sp_v3.0_unigene59594 SustainPine v3.0 359
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene59622 SustainPine v3.0 153
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q56GE2_GINBI 2.0e-13
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene60413 SustainPine v3.0 363
• AutoFact: F5K24.2 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZPG3_ARATH 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F5K24.2 protein 5.361e-06
Internal
sp_v3.0_unigene60421 SustainPine v3.0 497
• AutoFact: Receptor protein kinase, putative [Solanum bulbocastanum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 8.993e-18
Internal
sp_v3.0_unigene60796 SustainPine v3.0 289
• AutoFact: Tubulin beta chain, putative n=1 Tax=Ricinus communis RepID=B9SB77_RICCO 4.06377e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 2 6.649e-08
Internal
sp_v3.0_unigene60822 SustainPine v3.0 114
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q56GE2_GINBI 4.0e-11
• FL-Next: tr=F7F22.17, putative; Asparagus officinalis (Garden asparagus). 0.0
• Sma3: Reverse transcriptase 1.435e-06
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain