Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene52188 SustainPine v3.0 169
• AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Sma3: Myosin XI, putative 2.271e-13
Internal
sp_v3.0_unigene52858 SustainPine v3.0 160
• AutoFact: Thioredoxin n=1 Tax=Lilium longiflorum RepID=Q40230_LILLO 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thioredoxin-like 1 8.432e-17
Internal
sp_v3.0_unigene52907 SustainPine v3.0 350
• AutoFact: Tubulin alpha-1 chain (Fragment) n=3 Tax=Magnoliophyta RepID=A6MZU0_ORYSI 7.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha-tubulin 5.289e-10
Putative C-terminus
sp_v3.0_unigene52990 SustainPine v3.0 403
• AutoFact: NAC domain containing protein 35 [Arabidopsis thaliana] gb|AAC78526.2| NAM (no apical meristem)-like protein [Arabidopsis thaliana] gb|AEC05582.1| NAC domain containing protein 35 [Arabidopsis thaliana] 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
N-terminus
sp_v3.0_unigene53075 SustainPine v3.0 222
• AutoFact: Phosphoinositide phosphatase family protein [Arabidopsis thaliana] gb|AAK91448.1| At3g14201 [Arabidopsis thaliana] gb|AAM16260.1| at3g14201/at3g14201 [Arabidopsis thaliana] gb|AAP49835.1| SAC domain protein 2 [Arabidopsis thaliana] gb|AEE75486.1| Phosphoi 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Phosphoinositide 5-phosphatase, putative 7.632e-09
Internal
sp_v3.0_unigene53303 SustainPine v3.0 234
• AutoFact: Serine/threonine-protein kinase PBS1, putative n=1 Tax=Ricinus communis RepID=B9RNY7_RICCO 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative 1.551e-07
Internal
sp_v3.0_unigene53372 SustainPine v3.0 435
• AutoFact: protein serine/threonine kinase-like protein [Arabidopsis thaliana] 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene53523 SustainPine v3.0 493
• AutoFact: CCHC-type integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCC5_POPTR 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polyprotein 7.878e-09
Internal
sp_v3.0_unigene53555 SustainPine v3.0 303
• AutoFact: putative receptor kinase 5 [Oryza sativa Japonica Group] 7.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 2.661e-20
Internal
sp_v3.0_unigene53663 SustainPine v3.0 290
• AutoFact: Receptor protein kinase, putative [Solanum bulbocastanum] 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome undetermined scaffold_278, whole genome shotgun sequence 2.248e-15
Putative N-terminus
sp_v3.0_unigene54635 SustainPine v3.0 387
• AutoFact: NAC domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T364_RICCO 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein 4.223e-39
N-terminus
sp_v3.0_unigene55342 SustainPine v3.0 367
• AutoFact: PREDICTED: tubulin beta chain-like n=1 Tax=Ailuropoda melanoleuca RepID=UPI0001DEC983 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 2.23e-09
Internal
sp_v3.0_unigene55426 SustainPine v3.0 368
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene55547 SustainPine v3.0 189
• AutoFact: Tubulin beta chain, putative n=2 Tax=Eukaryota RepID=B9S382_RICCO 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 9.885e-11
Internal
sp_v3.0_unigene55606 SustainPine v3.0 408
• AutoFact: Tubulin beta chain n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JTY1_UNCRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 9.318e-11
Internal
sp_v3.0_unigene55848 SustainPine v3.0 507
• AutoFact: rve domain containing protein 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene55857 SustainPine v3.0 450
• AutoFact: TBB1_VOLCA Tubulin beta chain (ISS) n=2 Tax=Ostreococcus RepID=Q01GL4_OSTTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Beta tubulin 1.714e-08
Internal
sp_v3.0_unigene56201 SustainPine v3.0 266
• AutoFact: myosin XI [Nicotiana tabacum] 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Myosin XI, putative 3.219e-23
Internal
sp_v3.0_unigene56877 SustainPine v3.0 262
• AutoFact: Retrotransposon gag protein n=1 Tax=Asparagus officinalis RepID=Q2AA50_ASPOF 4.0e-29
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Putative N-terminus
sp_v3.0_unigene57144 SustainPine v3.0 308
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q56GE2_GINBI 4.0e-31
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Sma3: Reverse transcriptase 4.608e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain