Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene42561 SustainPine v3.0 465
• AutoFact: Multicopper oxidase n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD6_CUCME 6.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multicopper oxidase, putative 1.759e-37
N-terminus
sp_v3.0_unigene43075 SustainPine v3.0 525
• AutoFact: Putative pectinesterase [Arabidopsis thaliana] 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Multicopper oxidase, putative 1.4e-40
Internal
sp_v3.0_unigene43873 SustainPine v3.0 455
• AutoFact: F5K24.2 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZPG3_ARATH 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: F5K24.2 protein 5.361e-06
Internal
sp_v3.0_unigene43918 SustainPine v3.0 265
• AutoFact: Myosin XIa n=3 Tax=Physcomitrella patens RepID=D6R266_9BRYO 6.0e-39
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Sma3: Myosin XI, putative 1.303e-15
Internal
sp_v3.0_unigene44252 SustainPine v3.0 419
• AutoFact: PREDICTED: LOW QUALITY PROTEIN: tubulin alpha-3C/D chain-like n=1 Tax=Pongo abelii RepID=UPI0001D601A7 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Tubulin alpha-2 chain 1.459e-09
C-terminus
sp_v3.0_unigene44265 SustainPine v3.0 3957
• AutoFact: octicosapeptide/Phox/Be.1 domain-containing protein kinase [Arabidopsis thaliana] ref|NP_001185010.1| octicosapeptide/Phox/Be.1 domain-containing protein kinase [Arabidopsis thaliana] gb|AAD34679.1|AC006341_7 Contains PF|00069 Eukaryotic protein kinase do 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 2.569e-18
Complete
sp_v3.0_unigene44288 SustainPine v3.0 476
• AutoFact: NAC transcription factor [Hordeum vulgare subsp. vulgare] 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Internal
sp_v3.0_unigene45023 SustainPine v3.0 265
• AutoFact: NAC protein 1 n=2 Tax=Elaeis guineensis RepID=Q2XQF5_ELAGV 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein 1.148e-32
N-terminus
sp_v3.0_unigene45100 SustainPine v3.0 465
• AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Alpha tubulin 4.858e-24
Internal
sp_v3.0_unigene45122 SustainPine v3.0 480
• AutoFact: adenine nucleotide alpha hydrolases-domain containing protein kinase [Arabidopsis thaliana] gb|AAL57632.1| At1g21590/F24J8_9 [Arabidopsis thaliana] gb|AAM98263.1| At1g21590/F24J8_9 [Arabidopsis thaliana] gb|AEE30121.1| adenine nucleotide alpha hydrolases- 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP binding protein, putative 4.21e-13
Internal
sp_v3.0_unigene45504 SustainPine v3.0 262
• AutoFact: PREDICTED: tubulin beta-6 chain isoform 3 n=1 Tax=Pan troglodytes RepID=UPI00020E4624 1.0e-05
• FL-Next: tr=Beta-tubulin 2; Nicotiana tabacum (Common tobacco). 0.0
• Sma3: Tubulin beta chain 4.071e-15
Complete
sp_v3.0_unigene45581 SustainPine v3.0 305
• AutoFact: NAC domain protein, IPR003441 n=1 Tax=Populus trichocarpa RepID=B9IJW7_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NAC domain protein, IPR003441 0.0
Internal
sp_v3.0_unigene45706 SustainPine v3.0 691
• AutoFact: Phosphoinositide phosphatase family protein [Arabidopsis thaliana] gb|AAK91448.1| At3g14201 [Arabidopsis thaliana] gb|AAM16260.1| at3g14201/at3g14201 [Arabidopsis thaliana] gb|AAP49835.1| SAC domain protein 2 [Arabidopsis thaliana] gb|AEE75486.1| Phosphoi 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Phosphoinositide 5-phosphatase, putative 3.677e-13
Internal
sp_v3.0_unigene45897 SustainPine v3.0 1089
• AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.246e-14
Putative Complete
sp_v3.0_unigene45906 SustainPine v3.0 3532
• AutoFact: pfam00078, RVT_1, Reverse transcriptase (RNA-dependent DNA polymerase) 8.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene45908 SustainPine v3.0 492
• AutoFact: Unassigned protein
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative C-terminus
sp_v3.0_unigene46039 SustainPine v3.0 661
• AutoFact: paired amphipathic helix repeat-containing protein / transcription regulator-related [Musa acuminata] 4.0e-22
• FL-Next: sp=Paired amphipathic helix protein Sin3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative histone deacetylase complex, SIN3 component 9.484e-17
Internal
sp_v3.0_unigene47045 SustainPine v3.0 1046
• AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Serine/threonine protein kinase, putative 3.753e-18
Complete
sp_v3.0_unigene47403 SustainPine v3.0 1261
• AutoFact: NAC domain containing protein 36 [Arabidopsis thaliana] gb|AEC06578.1| NAC domain containing protein 36 [Arabidopsis thaliana] 1.00053e-42
• FL-Next: sp=NAC domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: NAC domain protein, IPR003441 1.893e-40
Complete
sp_v3.0_unigene47774 SustainPine v3.0 2475
• AutoFact: rve multi-domain protein 1.0e-11
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00750; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain