Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat

Term: IPR019734  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene98411 SustainPine v3.0 674
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pollenless3 9.419e-12
N-terminus
sp_v3.0_unigene98916 SustainPine v3.0 786
AutoFact: Heat shock protein DnaJ with tetratricopeptide repeat [Arabidopsis thaliana] gb|AAO42881.1| At4g02100 [Arabidopsis thaliana] dbj|BAE99548.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82124.1| Heat shock protein DnaJ with tetratricopeptide repeat [ 2.0e-37
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene99228 SustainPine v3.0 612
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene99466 SustainPine v3.0 946
AutoFact: Peptidyl-prolyl cis-trans isomerase CYP40 [Arabidopsis thaliana] sp|Q9C566.1|CYP40_ARATH RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP40; Short=PPIase CYP40; AltName: Full=Cyclophilin of 40 kDa; Short=Cyclophilin-40; AltName: Full=Protein SQUINT; 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene99774 SustainPine v3.0 586
AutoFact: DNAJ heat shock N-terminal domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=Q9FFK2_ARATH 8.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chaperone protein dnaJ 49 2.447e-09
N-terminus
sp_v3.0_unigene99986 SustainPine v3.0 550
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene100325 SustainPine v3.0 424
AutoFact: Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U572_VITVI 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative C-terminus
sp_v3.0_unigene100408 SustainPine v3.0 495
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TPR repeat 2.522e-09
Internal
sp_v3.0_unigene101188 SustainPine v3.0 440
AutoFact: Tetratricopeptide repeat-containing protein n=4 Tax=Arabidopsis RepID=F4HS68_ARATH 1.0e-19
FL-Next: tr=EMB2753; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Internal
sp_v3.0_unigene101330 SustainPine v3.0 1076
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAO14644.1|AF474176_1 pollen-specific calmodulin-binding protein [Arabidopsis thaliana] gb|ACI49798.1| At2g43040 [Arabidopsis thaliana] gb|AEC10202.1| tetratricopeptide repeat-containin 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Sma3: TPR Domain containing protein, expressed 7.619e-09
N-terminus
sp_v3.0_unigene101740 SustainPine v3.0 335
AutoFact: anaphase-promoting complex subunit 6 [Arabidopsis thaliana] sp|B3DNN5.1|CDC16_ARATH RecName: Full=Anaphase-promoting complex subunit 6; AltName: Full=Cell division cycle protein 16 homolog; Short=CDC16 homolog; AltName: Full=Cyclosome subunit 6; AltName: 6.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene101987 SustainPine v3.0 713
AutoFact: Heat shock 70 kDa protein n=3 Tax=rosids RepID=HSP70_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene102031 SustainPine v3.0 1057
AutoFact: Heat shock protein DnaJ with tetratricopeptide repeat [Arabidopsis thaliana] gb|AED91808.1| Heat shock protein DnaJ with tetratricopeptide repeat [Arabidopsis thaliana] 0.0
FL-Next: sp=Inactive TPR repeat-containing thioredoxin TTL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene102311 SustainPine v3.0 869
AutoFact: SPINDLY n=1 Tax=Sinningia speciosa RepID=B5AY31_9LAMI 0.0
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Petunia hybrida (Petunia). 0.0
Sma3: Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 2.116e-24
N-terminus
sp_v3.0_unigene102470 SustainPine v3.0 734
AutoFact: Phototropic-responsive NPH3 family protein [Arabidopsis thaliana] sp|Q9C5J4.1|Y3210_ARATH RecName: Full=BTB/POZ domain-containing protein At3g22104 gb|AAK25920.1|AF360210_1 unknown protein [Arabidopsis thaliana] gb|AAK64116.1| unknown protein [Arabidopsis 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene102813 SustainPine v3.0 417
AutoFact: Plant RNA cleavage stimulation factor, putative n=1 Tax=Ricinus communis RepID=B9S078_RICCO 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene102832 SustainPine v3.0 385
AutoFact: Copia LTR rider n=1 Tax=Solanum lycopersicum RepID=B1N668_SOLLC 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 6.503e-23
Internal
sp_v3.0_unigene102834 SustainPine v3.0 498
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Kinesin light chain, putative 9.807e-15
Internal
sp_v3.0_unigene102919 SustainPine v3.0 940
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AED97054.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene102982 SustainPine v3.0 342
AutoFact: heat shock protein 70 [Arabidopsis thaliana] 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Sma3: Heat shock protein 70 1.084e-29
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain