Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat

Term: IPR019734  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene79414 SustainPine v3.0 175
• AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AEE31589.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 5.0e-10
• FL-Next: tr=Tetratricopeptide repeat-containing protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene79566 SustainPine v3.0 249
• AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Picea sitchensis RepID=A9NLD0_PICSI 2.0e-31
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Internal
sp_v3.0_unigene79897 SustainPine v3.0 255
• AutoFact: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain [Arabidopsis thaliana] dbj|BAD43475.1| putative protein kinase [Arabidopsis thaliana] gb|AEE29603.1| Protein kinase protein with adenine nucleotide alpha hydrolases-like domain [A 7.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: E3 ubiquitin ligase 3.32e-18
Internal
sp_v3.0_unigene79975 SustainPine v3.0 320
• AutoFact: Amidase, putative n=1 Tax=Ricinus communis RepID=B9RF45_RICCO 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Amidase family protein 1.272e-08
Internal
sp_v3.0_unigene80917 SustainPine v3.0 158
• AutoFact: anaphase-promoting complex subunit 8-like protein [Oryza sativa] 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene81400 SustainPine v3.0 195
• AutoFact: putative O-linked N-acetyl glucosamine transferase [Oryza sativa Japonica Group] dbj|BAD21878.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa Japonica Group] 3.0e-20
• FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene81494 SustainPine v3.0 107
• AutoFact: Unassigned protein
• FL-Next: tr=Uncharacterized protein; Brachypodium distachyon (Purple false brome) (Trachynia distachya). 0.0
Internal
sp_v3.0_unigene81780 SustainPine v3.0 152
• AutoFact: putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Arabidopsis thaliana] sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; AltName: Full=Protein SECRET AGENT gb|A 3.0e-07
• FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Chromosome undetermined scaffold_62, whole genome shotgun sequence 6.192e-06
Internal
sp_v3.0_unigene86969 SustainPine v3.0 304
• AutoFact: Nuclear-enriched ubiquitin-like polyubiquitin-binding protein, putative; Dsk2p n=3 Tax=Filobasidiella/Cryptococcus neoformans species complex RepID=E6R1A0_CRYGW 6.0e-11
coding
sp_v3.0_unigene93610 SustainPine v3.0 2741
• AutoFact: [R] COG0790 FOG: TPR repeat, SEL1 subfamily 5.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene93631 SustainPine v3.0 1066
• AutoFact: Putative TPR domain containing protein, identical [Solanum demissum] 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative uncharacterized protein 0.0
Putative Complete
sp_v3.0_unigene93930 SustainPine v3.0 1265
• AutoFact: Peptidyl-prolyl isomerase n=1 Tax=Zea mays RepID=B6TI78_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Peptidylprolyl isomerase, putative 4.112e-15
Putative C-terminus
sp_v3.0_unigene94448 SustainPine v3.0 406
• AutoFact: Heat shock cognate 70 kDa protein 2 n=13 Tax=Magnoliophyta RepID=HSP72_ARATH 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Heat shock protein 70 2.273e-29
N-terminus
sp_v3.0_unigene94524 SustainPine v3.0 625
• AutoFact: anaphase-promoting complex subunit 8-like protein [Oryza sativa] 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene94650 SustainPine v3.0 628
• AutoFact: phosphoinositide binding protein [Arabidopsis thaliana] gb|AAR23716.1| At1g61690 [Arabidopsis thaliana] dbj|BAD93965.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33876.1| phosphoinositide binding protein [Arabidopsis thaliana] 4.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene94798 SustainPine v3.0 334
• AutoFact: Glycoside hydrolase family 17 protein n=2 Tax=Eumusa RepID=Q1EP15_MUSBA 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinesin light chain 2.145e-08
Internal
sp_v3.0_unigene95843 SustainPine v3.0 512
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Sma3: Heat shock protein 70 (HSP70)-interacting protein, putative 2.703e-10
Internal
sp_v3.0_unigene96087 SustainPine v3.0 2015
• AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 7.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TPR domain protein 1.327e-08
Putative Complete
sp_v3.0_unigene96371 SustainPine v3.0 1426
• AutoFact: molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana] ref|NP_849910.1| molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana] ref|NP_849911.1| molecular chaperone Hsp40/DnaJ-like protein [Arabidopsis thaliana] dbj|BAF01446.1| hypo 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chaperone protein DNAj, putative 2.188e-08
Putative Complete
sp_v3.0_unigene97743 SustainPine v3.0 362
• AutoFact: CTR1-like protein kinase [Rosa hybrid cultivar] 4.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Map3k delta-1 protein kinase, putative 1.49e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain