Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat

Term: IPR019734  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene50995 SustainPine v3.0 214
AutoFact: Peptidylprolyl isomerase, putative n=2 Tax=Ricinus communis RepID=B9T7Z2_RICCO 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl isomerase 3.623e-08
Internal
sp_v3.0_unigene51024 SustainPine v3.0 741
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Peptidyl-prolyl cis-trans isomerase PASTICCINO1 OS=Arabidopsis thaliana GN=PAS1 0.0
Internal
sp_v3.0_unigene52205 SustainPine v3.0 291
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.865e-38
Internal
sp_v3.0_unigene52206 SustainPine v3.0 447
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 9.674e-18
Internal
sp_v3.0_unigene52596 SustainPine v3.0 295
AutoFact: DnaJ domain containing protein 8.0e-05
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene52886 SustainPine v3.0 407
AutoFact: Putative TPR domain containing protein, identical [Solanum demissum] 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene53373 SustainPine v3.0 321
AutoFact: DUF3444 domain containing protein 8.0e-32
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene53438 SustainPine v3.0 475
AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 1.0e-31
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Copia-type polyprotein 7.188e-12
C-terminus
sp_v3.0_unigene53512 SustainPine v3.0 238
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.433e-23
Internal
sp_v3.0_unigene53667 SustainPine v3.0 393
AutoFact: Unassigned protein 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene53833 SustainPine v3.0 468
AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9SS47_RICCO 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: O-linked n-acetylglucosamine transferase, ogt, putative 9.381e-07
Internal
sp_v3.0_unigene54016 SustainPine v3.0 264
AutoFact: rve domain containing protein 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.386e-15
Internal
sp_v3.0_unigene54360 SustainPine v3.0 489
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene55549 SustainPine v3.0 368
AutoFact: Thioredoxin H-type n=5 Tax=Picea RepID=TRXH_PICMA 1.99965e-42
FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thioredoxin h 1.172e-40
N-terminus
sp_v3.0_unigene55612 SustainPine v3.0 415
AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE 4.0e-33
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Copia-type polyprotein 2.305e-11
Putative C-terminus
sp_v3.0_unigene55941 SustainPine v3.0 289
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHT5_ARATH 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.267e-11
Putative N-terminus
sp_v3.0_unigene56442 SustainPine v3.0 324
AutoFact: RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Short=EgSPY dbj|BAC11808.1| SPINDLY [Eustoma grandiflorum] 3.0e-15
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; grandiflorum). 0.0
Sma3: Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY 7.318e-16
Internal
sp_v3.0_unigene56553 SustainPine v3.0 484
AutoFact: peptidylprolyl isomerase [Triticum aestivum] 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: FKBP-type peptidyl-prolyl cis-trans isomerase 2.088e-08
N-terminus
sp_v3.0_unigene56844 SustainPine v3.0 388
AutoFact: SET domain-containing protein C (Fragment) n=15 Tax=Pinus RepID=B0ZR10_PINTA 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SET domain-containing protein C 1.376e-08
Internal
sp_v3.0_unigene56913 SustainPine v3.0 474
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.41e-27
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain