Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat

Term: IPR019734  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene36065 SustainPine v3.0 551
AutoFact: RecName: Full=Luminal-binding protein 5; Short=BiP 5; AltName: Full=78 kDa glucose-regulated protein homolog 5; Short=GRP-78-5; Flags: Precursor emb|CAA42660.1| luminal binding protein (BiP) [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 0.0
Internal
sp_v3.0_unigene36235 SustainPine v3.0 1021
AutoFact: tetratricopeptide repeat (TPR)-containing protein-like protein [Oryza sativa Japonica Group] 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene36372 SustainPine v3.0 725
AutoFact: Thioredoxin H-type n=5 Tax=Picea RepID=TRXH_PICMA 7.0e-25
FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thioredoxin h 0.0
Putative Complete
sp_v3.0_unigene36910 SustainPine v3.0 2563
AutoFact: [O] COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidyl-prolyl isomerase PASTICCINO1 2.643e-09
Putative C-terminus
sp_v3.0_unigene37112 SustainPine v3.0 636
AutoFact: E3 ubiquitin-protein ligase CHIP n=2 Tax=Arabidopsis RepID=CHIP_ARATH 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene37458 SustainPine v3.0 1944
AutoFact: Heat shock protein 70 (HSP70)-interacting protein, putative n=1 Tax=Ricinus communis RepID=B9RJ86_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene37491 SustainPine v3.0 525
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene37539 SustainPine v3.0 1227
AutoFact: peroxisomal targeting signal 1 receptor [Nicotiana tabacum] 0.0
FL-Next: sp=Peroxisome biogenesis protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene37854 SustainPine v3.0 2032
AutoFact: [R] COG0790 FOG: TPR repeat, SEL1 subfamily 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene37865 SustainPine v3.0 1807
AutoFact: ABI3-interacting protein 1 n=1 Tax=Callitropsis nootkatensis RepID=Q84NF7_9CONI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Tetratricoredoxin 3.985e-08
C-terminus
sp_v3.0_unigene38824 SustainPine v3.0 1753
AutoFact: octicosapeptide/Phox/Bem1p and tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] emb|CAA16582.1| putative protein [Arabidopsis thaliana] emb|CAB79925.1| putative protein [Arabidopsis thaliana] gb|AEE86001.1| octicosapeptide/Phox/Be 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 (HSP70)-interacting protein, putative 4.442e-10
Complete
sp_v3.0_unigene39063 SustainPine v3.0 625
AutoFact: Heat shock protein 70 (HSP70)-interacting protein, putative n=1 Tax=Ricinus communis RepID=B9RTL2_RICCO 2.0e-31
FL-Next: tr=Heat shock protein 70 (HSP70)-interacting protein, putative; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene40605 SustainPine v3.0 995
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.142e-18
Putative C-terminus
sp_v3.0_unigene40893 SustainPine v3.0 628
AutoFact: Unassigned protein
FL-Next: sp=Protein TONSOKU; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene40922 SustainPine v3.0 449
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene40999 SustainPine v3.0 519
AutoFact: Heat shock cognate 70 kDa protein n=7 Tax=Magnoliophyta RepID=HSP7C_PETHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 3.354e-37
Internal
sp_v3.0_unigene41151 SustainPine v3.0 1608
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 5.447e-08
Putative Complete
sp_v3.0_unigene41302 SustainPine v3.0 337
AutoFact: cleavage stimulation factor 77 [Arabidopsis thaliana] 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene41439 SustainPine v3.0 367
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] dbj|BAB10514.1| unnamed protein product [Arabidopsis thaliana] gb|AED92407.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene42359 SustainPine v3.0 1614
AutoFact: Heat shock protein 70 (Fragment) n=1 Tax=Picea glauca RepID=Q40846_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Heat shock protein 70 1.079e-41
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain