Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Tetratricopeptide repeat

Term: IPR019734  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene33650 SustainPine v3.0 786
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, unclassified 4.844e-18
C-terminus
sp_v3.0_unigene33882 SustainPine v3.0 480
AutoFact: Thioredoxin H-type n=5 Tax=Picea RepID=TRXH_PICMA 1.4013e-45
FL-Next: sp=Thioredoxin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Thioredoxin h 2.982e-31
Complete
sp_v3.0_unigene34132 SustainPine v3.0 1292
AutoFact: [R] COG0790 FOG: TPR repeat, SEL1 subfamily 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene34133 SustainPine v3.0 2837
AutoFact: cell division cycle protein 27-B [Arabidopsis thaliana] sp|Q8LGU6.1|CD27B_ARATH RecName: Full=Cell division cycle protein 27 homolog B; Short=CDC27 homolog B; AltName: Full=Protein HOBBIT emb|CAD31951.1| HOBBIT protein [Arabidopsis thaliana] gb|AEC06953.1 0.0
FL-Next: sp=Cell division cycle protein 27 homolog B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene34142 SustainPine v3.0 2258
AutoFact: Peptidyl-prolyl isomerase n=1 Tax=Zea mays RepID=B6TI78_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Peptidylprolyl isomerase, putative 1.503e-14
Complete
sp_v3.0_unigene34250 SustainPine v3.0 756
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TPR domain protein 2.922e-08
C-terminus
sp_v3.0_unigene34361 SustainPine v3.0 1786
AutoFact: Heat shock protein DnaJ [Medicago truncatula] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative C-terminus
sp_v3.0_unigene34369 SustainPine v3.0 598
AutoFact: transcription-coupled DNA repair protein-related; K12867 pre-mRNA-splicing factor SYF1 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
sp_v3.0_unigene34424 SustainPine v3.0 3917
AutoFact: putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Arabidopsis thaliana] sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; AltName: Full=Protein SECRET AGENT gb|A 0.0
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Predicted protein 0.0
Complete
sp_v3.0_unigene34523 SustainPine v3.0 494
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Putative N-terminus
sp_v3.0_unigene34719 SustainPine v3.0 1755
AutoFact: FYVE zinc finger containing protein [Oryza sativa Japonica Group] gb|ABF98106.1| FYVE zinc finger family protein, expressed [Oryza sativa Japonica Group] 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene34868 SustainPine v3.0 1570
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: TPR domain protein 1.122e-08
Putative Complete
sp_v3.0_unigene35000 SustainPine v3.0 523
AutoFact: Tetratricopeptide repeat-containing protein n=4 Tax=Arabidopsis RepID=F4HS99_ARATH 4.0e-23
FL-Next: tr=Tetratricopeptide repeat-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: Eukaryotic translation initiation factor 3 subunit, putative 2.82e-07
Internal
sp_v3.0_unigene35019 SustainPine v3.0 2194
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|ACL13985.1| At5g21990 [Arabidopsis thaliana] gb|AED92964.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene35274 SustainPine v3.0 326
AutoFact: Unassigned protein
FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Internal
sp_v3.0_unigene35377 SustainPine v3.0 362
AutoFact: Tetratricopeptide repeat-containing protein n=4 Tax=Arabidopsis RepID=F4HS99_ARATH 1.0e-32
FL-Next: tr=Tetratricopeptide repeat-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Sma3: Eukaryotic translation initiation factor 3 subunit, putative 3.734e-07
Internal
sp_v3.0_unigene35598 SustainPine v3.0 639
AutoFact: Peptidyl-prolyl cis-trans isomerase n=4 Tax=Pinaceae RepID=C9EGT5_9CONI 3.0e-32
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Pinus halepensis (Aleppo pine). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Putative Complete
sp_v3.0_unigene35701 SustainPine v3.0 1740
AutoFact: protein N-terminal asparagine amidohydrolase family protein [Arabidopsis thaliana] gb|AAC16088.2| expressed protein [Arabidopsis thaliana] dbj|BAC42174.1| unknown protein [Arabidopsis thaliana] gb|AAO50636.1| unknown protein [Arabidopsis thaliana] gb|AEC1 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Complete
sp_v3.0_unigene35745 SustainPine v3.0 643
AutoFact: Chloroplast FLU-like protein (Fragment) n=1 Tax=Picea abies RepID=D2K2R8_PICAB 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene35779 SustainPine v3.0 752
AutoFact: Peptidyl-prolyl cis-trans isomerase n=1 Tax=Phlebotomus papatasi RepID=A8C9X3_PHLPP 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Ostreococcus lucimarinus (strain CCE9901). 0.0
Sma3: Peptidyl-prolyl cis-trans isomerase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain