Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Ribosomal protein S15

Term: IPR000589  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene559 SustainPine v3.0 1527
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SSI9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 5.22e-20
Complete
sp_v3.0_unigene4564 SustainPine v3.0 425
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 1.379e-22
N-terminus
sp_v3.0_unigene7146 SustainPine v3.0 2322
AutoFact: 40S ribosomal protein S13-1 n=22 Tax=core eudicotyledons RepID=RS131_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene11829 SustainPine v3.0 437
AutoFact: 40S ribosomal protein S13, putative [Solanum demissum] 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S13 2.281e-14
C-terminus
sp_v3.0_unigene17908 SustainPine v3.0 1340
AutoFact: putative GDSL-motif lipase/hydrolase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 9.061e-22
Complete
sp_v3.0_unigene18024 SustainPine v3.0 1372
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SSI9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 8.965e-18
Complete
sp_v3.0_unigene18815 SustainPine v3.0 2155
AutoFact: S15/NS1, RNA-binding protein [Arabidopsis thaliana] gb|AAF82151.1|AC034256_15 Contains similarity to an unknown protein T21F11.5 gi|6730725 from Arabidopsis thaliana BAC T21F11 gb|AC018849 and contains a Ribosomal Protein S15 PF|00312 domain gb|AAK32782.1 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Sma3: Chromosome undetermined scaffold_108, whole genome shotgun sequence 7.92e-09
Complete
sp_v3.0_unigene19945 SustainPine v3.0 1165
AutoFact: 40S ribosomal protein S13-1 n=22 Tax=core eudicotyledons RepID=RS131_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene21817 SustainPine v3.0 1203
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SYX7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 2.139e-22
Complete
sp_v3.0_unigene21842 SustainPine v3.0 603
AutoFact: 40S ribosomal protein S13 n=4 Tax=Schizosaccharomyces RepID=RS13_SCHPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S13 2.85e-14
Complete
sp_v3.0_unigene22838 SustainPine v3.0 1341
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SN62_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Zinc finger protein, putative 9.422e-17
Complete
sp_v3.0_unigene24103 SustainPine v3.0 581
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=E0CQA8_VITVI 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Anther-specific proline-rich protein APG 2.5e-17
N-terminus
sp_v3.0_unigene24578 SustainPine v3.0 447
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 7.0e-40
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Sma3: Retrotransposon protein, putative, unclassified 1.873e-17
C-terminus
sp_v3.0_unigene27878 SustainPine v3.0 570
AutoFact: 40S ribosomal protein S13-1 n=22 Tax=core eudicotyledons RepID=RS131_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S13 2.325e-14
Complete
sp_v3.0_unigene28143 SustainPine v3.0 553
AutoFact: 40S ribosomal protein S13 n=14 Tax=Schizophora RepID=RS13_DROME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S13 2.195e-14
Complete
sp_v3.0_unigene28360 SustainPine v3.0 538
AutoFact: RecName: Full=40S ribosomal protein S13 emb|CAA80974.1| ribosomal protein S13 [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S13 2.325e-14
Complete
sp_v3.0_unigene30962 SustainPine v3.0 606
AutoFact: 40S ribosomal protein S13 n=58 Tax=Deuterostomia RepID=RS13_HUMAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S13 2.85e-14
Complete
sp_v3.0_unigene31004 SustainPine v3.0 576
AutoFact: 40S ribosomal protein S13 n=58 Tax=Deuterostomia RepID=RS13_HUMAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S13 2.85e-14
Complete
sp_v3.0_unigene31418 SustainPine v3.0 364
AutoFact: 40S ribosomal protein S13 [Lodderomyces elongisporus NRRL YB-4239] gb|EDK46532.1| 40S ribosomal protein S13 [Lodderomyces elongisporus NRRL YB-4239] 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 40S ribosomal protein S13 2.799e-14
C-terminus
sp_v3.0_unigene31555 SustainPine v3.0 585
AutoFact: 40S ribosomal protein S13 n=1 Tax=Phytophthora infestans T30-4 RepID=D0P2D2_PHYIT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RS13, ribosomal protein 13 40S small ribosomal subunit 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain