Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Transcription factor GRAS

Term: IPR005202  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene69716 SustainPine v3.0 203
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene71596 SustainPine v3.0 356
• AutoFact: Putative retroelement n=2 Tax=Oryza sativa RepID=Q8H8K3_ORYSJ 4.0e-39
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.487e-38
C-terminus
sp_v3.0_unigene76074 SustainPine v3.0 376
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-24
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.069e-13
Putative C-terminus
sp_v3.0_unigene78366 SustainPine v3.0 350
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Putative C-terminus
sp_v3.0_unigene81718 SustainPine v3.0 402
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 5.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 8.318e-17
Putative C-terminus
sp_v3.0_unigene94986 SustainPine v3.0 597
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 9.99967e-42
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 2.1e-11
C-terminus
sp_v3.0_unigene98909 SustainPine v3.0 521
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 5.518e-08
N-terminus
sp_v3.0_unigene101625 SustainPine v3.0 1152
• AutoFact: GRAS family transcription factor n=2 Tax=Populus trichocarpa RepID=B9GKM9_POPTR 0.0
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Sma3: GRAS family transcription factor 1.602e-13
Internal
sp_v3.0_unigene104094 SustainPine v3.0 423
• AutoFact: SCL domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJB5_MALDO 4.06377e-44
• FL-Next: tr=SHORT-ROOT-like protein; Pinus taeda (Loblolly pine). 0.0
• Sma3: GRAS family transcription factor 8.335e-12
Internal
sp_v3.0_unigene108465 SustainPine v3.0 569
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 5.0e-37
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Copia-type polyprotein 8.05e-11
Putative C-terminus
sp_v3.0_unigene123517 SustainPine v3.0 203
• AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 6.0e-27
• FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
• Sma3: GRAS family transcription factor 1.494e-24
Internal
sp_v3.0_unigene129508 SustainPine v3.0 358
• AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 5.819e-11
C-terminus
sp_v3.0_unigene140522 SustainPine v3.0 741
• AutoFact: Phytochrome A-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0Z8K8_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: GRAS family transcription factor 1.154e-28
C-terminus
sp_v3.0_unigene140990 SustainPine v3.0 668
• AutoFact: SCARECROW-like protein 1 n=1 Tax=Pinus radiata RepID=A3E2G2_PINRA 2.0e-30
• FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: GRAS family transcription factor 4.422e-25
C-terminus
sp_v3.0_unigene142361 SustainPine v3.0 812
• AutoFact: DELLA protein GAI, putative n=1 Tax=Ricinus communis RepID=B9T711_RICCO 8.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DELLA protein 5.32493e-44
Putative C-terminus
sp_v3.0_unigene145976 SustainPine v3.0 1367
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.226e-21
C-terminus
sp_v3.0_unigene146053 SustainPine v3.0 662
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 1.4013e-45
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Copia-type polyprotein 4.844e-11
C-terminus
sp_v3.0_unigene146062 SustainPine v3.0 515
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 9.99995e-41
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Sma3: Copia-type polyprotein 6.983e-11
Putative C-terminus
sp_v3.0_unigene147997 SustainPine v3.0 487
• AutoFact: Integrase n=2 Tax=Beta vulgaris RepID=A2I5F8_BETVU 4.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 8.48e-28
C-terminus
sp_v3.0_unigene148055 SustainPine v3.0 410
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 8.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative polyprotein 1.624e-10
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain