Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: TonB box, conserved site

Term: IPR010916  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene132276 SustainPine v3.0 369
AutoFact: cell division control protein 48-D [Arabidopsis thaliana] sp|Q9SCN8.1|CD48D_ARATH RecName: Full=Cell division control protein 48 homolog D; Short=AtCDC48d; AltName: Full=Transitional endoplasmic reticulum ATPase D emb|CAB64226.1| CDC48-like protein [Arabi 1.0e-24
FL-Next: sp=Cell division control protein 48 homolog D; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cell division cycle protein 48 homolog 3.757e-12
C-terminus
sp_v3.0_unigene132480 SustainPine v3.0 321
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 2.266e-11
Internal
sp_v3.0_unigene132692 SustainPine v3.0 341
AutoFact: Cellular retinaldehyde-binding/triple function, C-terminal n=1 Tax=Medicago truncatula RepID=Q2HW59_MEDTR 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cellular retinaldehyde-binding/triple function, C-terminal 1.006e-16
Putative C-terminus
sp_v3.0_unigene133027 SustainPine v3.0 404
AutoFact: Ribulose-5-phosphate-3-epimerase n=2 Tax=Papilionoideae RepID=Q8S4X2_PEA 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ribulose-phosphate 3-epimerase, chloroplastic 3.528e-13
C-terminus
sp_v3.0_unigene133985 SustainPine v3.0 269
AutoFact: RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 1; AltName: Full=Cleavage and polyadenylation specificity factor 160 kDa subunit; Short=CPSF 160 kDa subunit emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group] 3.0e-16
FL-Next: sp=Probable cleavage and polyadenylation specificity factor subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: Probable cleavage and polyadenylation specificity factor subunit 1 7.054e-10
C-terminus
sp_v3.0_unigene134033 SustainPine v3.0 281
AutoFact: White-brown-complex ABC transporter family (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GG01_POPTR 6.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: White-brown-complex ABC transporter family 4.757e-16
Internal
sp_v3.0_unigene134203 SustainPine v3.0 262
AutoFact: cell division control protein 48-A [Arabidopsis thaliana] sp|P54609.1|CD48A_ARATH RecName: Full=Cell division control protein 48 homolog A; Short=AtCDC48a gb|AAF23260.1|AC015985_18 putative transitional endoplasmic reticulum ATPase [Arabidopsis thaliana] 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 homolog 4.274e-12
N-terminus
sp_v3.0_unigene134460 SustainPine v3.0 247
AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGG9.2|Y5344_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g53440; Flags: Precursor gb|AEE32941.1| putative LRR receptor-like serine 8.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_394, whole genome shotgun sequence 6.844e-06
Internal
sp_v3.0_unigene134854 SustainPine v3.0 349
AutoFact: [E] COG2957 Peptidylarginine deiminase and related enzymes 3.0e-05
FL-Next: tr=Putative agmatine iminohydrolase; Pinus sylvestris (Scots pine). 0.0
N-terminus
sp_v3.0_unigene134991 SustainPine v3.0 309
AutoFact: D-ribulose-5-phosphate-3-epimerase n=2 Tax=Arabidopsis RepID=Q9SAU2_ARATH 3.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentose-5-phosphate 3-epimerase 3.06e-16
Internal
sp_v3.0_unigene135070 SustainPine v3.0 309
AutoFact: mitogen-activated protein kinase 2 [Glycine max] 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Mitogen-activated protein kinase 1.179e-34
Internal
sp_v3.0_unigene135659 SustainPine v3.0 266
AutoFact: Glucan endo-1,3-beta-glucosidase 14 n=4 Tax=Arabidopsis RepID=E1314_ARATH 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative beta-1,3-glucanase 1.009e-22
Internal
sp_v3.0_unigene135733 SustainPine v3.0 346
AutoFact: Cu-oxidase_2 domain containing protein 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 0.0
Internal
sp_v3.0_unigene135946 SustainPine v3.0 346
AutoFact: DUF674 domain containing protein 8.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene135975 SustainPine v3.0 166
AutoFact: Putative sinapyl alcohol dehydrogenase (Fragment) n=1 Tax=Ginkgo biloba RepID=E5F5P7_GINBI 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cinnamyl alcohol dehydrogenase 6.24e-38
Internal
sp_v3.0_unigene136227 SustainPine v3.0 282
AutoFact: Caleosin n=1 Tax=Cycas revoluta RepID=B8XX15_CYCRE 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Caleosin 5.665e-21
Internal
sp_v3.0_unigene136290 SustainPine v3.0 222
AutoFact: Laccase n=2 Tax=Pinus taeda RepID=Q9AUI3_PINTA 1.0e-33
FL-Next: tr=Laccase; Pinus taeda (Loblolly pine). 0.0
Sma3: Laccase 1.07e-31
Internal
sp_v3.0_unigene136326 SustainPine v3.0 295
AutoFact: Laccase, putative n=1 Tax=Ricinus communis RepID=B9S478_RICCO 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Laccase, putative 4.06377e-44
Internal
sp_v3.0_unigene137599 SustainPine v3.0 220
AutoFact: [O] COG0464 ATPases of the AAA+ class 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cell division cycle protein 48 7.065e-14
Internal
sp_v3.0_unigene137660 SustainPine v3.0 260
AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pentatricopeptide repeat-containing protein, putative 1.406e-29
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain