Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: TRAM/LAG1/CLN8 homology domain

Term: IPR006634  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene2347 SustainPine v3.0 1268
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAR24215.1| At1g35180 [Arabidopsis thaliana] gb|AAU05502.1| At3g16870 [Arabidopsis thaliana] gb|AEE31763.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containi 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Complete
sp_v3.0_unigene2875 SustainPine v3.0 2214
AutoFact: RHO guanyl-nucleotide exchange factor 14 [Arabidopsis thaliana] dbj|BAD94650.1| hypothetical protein [Arabidopsis thaliana] gb|AEE31380.1| RHO guanyl-nucleotide exchange factor 14 [Arabidopsis thaliana] 0.0
FL-Next: sp=Rop guanine nucleotide exchange factor 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rop guanine nucleotide exchange factor, putative 9.655e-23
C-terminus
sp_v3.0_unigene3488 SustainPine v3.0 1663
AutoFact: ASC1-like protein n=1 Tax=Solanum lycopersicum RepID=ASCL_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ASC1-like protein 1 4.723e-16
Complete
sp_v3.0_unigene3979 SustainPine v3.0 2366
AutoFact: RHO guanyl-nucleotide exchange factor 7 [Arabidopsis thaliana] emb|CAB82974.1| putative protein [Arabidopsis thaliana] gb|AAU94394.1| At5g02010 [Arabidopsis thaliana] gb|AAV59279.1| At5g02010 [Arabidopsis thaliana] gb|AED90419.1| RHO guanyl-nucleotide exc 0.0
FL-Next: sp=Rop guanine nucleotide exchange factor 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rop guanine nucleotide exchange factor, putative 1.006e-22
C-terminus
sp_v3.0_unigene4366 SustainPine v3.0 1044
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAT68379.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AAT69230.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AEE77094.1| TRAM, LAG1 an 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5088 SustainPine v3.0 1202
AutoFact: LAG1 longevity assurance homolog 3 n=3 Tax=Arabidopsis RepID=LAG13_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ASC1-like protein 1 5.043e-16
Complete
sp_v3.0_unigene6187 SustainPine v3.0 1755
AutoFact: LAG1 longevity assurance homolog 2 [Arabidopsis thaliana] sp|Q9LJK3.1|LAG12_ARATH RecName: Full=LAG1 longevity assurance homolog 2; Short=LAG1 homolog 2 dbj|BAB02967.1| unnamed protein product [Arabidopsis thaliana] gb|AAM61539.1| longevity factor-like pr 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene6714 SustainPine v3.0 1947
AutoFact: RHO guanyl-nucleotide exchange factor 7 [Arabidopsis thaliana] emb|CAB82974.1| putative protein [Arabidopsis thaliana] gb|AAU94394.1| At5g02010 [Arabidopsis thaliana] gb|AAV59279.1| At5g02010 [Arabidopsis thaliana] gb|AED90419.1| RHO guanyl-nucleotide exc 0.0
FL-Next: sp=Rop guanine nucleotide exchange factor 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pollen-specific kinase partner protein 5.782e-23
C-terminus
sp_v3.0_unigene7187 SustainPine v3.0 1474
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAT68379.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AAT69230.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AEE77094.1| TRAM, LAG1 an 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene7479 SustainPine v3.0 1613
AutoFact: ASC1-like protein n=1 Tax=Solanum lycopersicum RepID=ASCL_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ASC1-like protein 1 4.723e-16
Complete
sp_v3.0_unigene7946 SustainPine v3.0 1801
AutoFact: LAG1-like protein 1 n=1 Tax=Orobanche cernua var. cumana RepID=C6KE70_OROCE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene8118 SustainPine v3.0 1616
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] ref|NP_849545.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] dbj|BAC43394.1| unknown protein [Arabidopsis thaliana] gb|AA 0.0
FL-Next: tr=Expressed protein; Oryza sativa subsp. japonica (Rice). 0.0
Complete
sp_v3.0_unigene8341 SustainPine v3.0 2661
AutoFact: Rop guanine nucleotide exchange factor 1 [Arabidopsis thaliana] sp|Q93ZY2.2|ROGF1_ARATH RecName: Full=Rop guanine nucleotide exchange factor 1; Short=RopGEF1; AltName: Full=Kinase partner protein-like; Short=KPP-like emb|CAB37499.1| putative protein [Arab 0.0
FL-Next: sp=Rop guanine nucleotide exchange factor 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rop guanine nucleotide exchange factor, putative 8.89e-23
Complete
sp_v3.0_unigene11597 SustainPine v3.0 1888
AutoFact: pollen-specific kinase partner protein [Solanum lycopersicum] 0.0
FL-Next: sp=Rho guanine nucleotide exchange factor 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rop guanine nucleotide exchange factor, putative 9.139e-23
Putative C-terminus
sp_v3.0_unigene14003 SustainPine v3.0 761
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAT68379.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AAT69230.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AEE77094.1| TRAM, LAG1 an 8.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Transcription regulator 2.665e-09
C-terminus
sp_v3.0_unigene14143 SustainPine v3.0 1248
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene28742 SustainPine v3.0 2338
AutoFact: pollen-specific kinase partner protein [Solanum lycopersicum] 0.0
FL-Next: sp=Rho guanine nucleotide exchange factor 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Rop guanine nucleotide exchange factor, putative 9.266e-23
Complete
sp_v3.0_unigene36086 SustainPine v3.0 501
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAT68379.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AAT69230.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AEE77094.1| TRAM, LAG1 an 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene51877 SustainPine v3.0 373
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene99525 SustainPine v3.0 548
AutoFact: pollen-specific kinase partner protein [Solanum lycopersicum] 0.0
FL-Next: sp=Rho guanine nucleotide exchange factor 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Pollen-specific kinase partner protein 3.09e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain