Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Immunoglobulin/major histocompatibility complex, conserved site

Term: IPR003006  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene149328 SustainPine v3.0 106
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Bazzania trilobata RepID=B3U1L9_BAZTR 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat protein 0.0
Internal
sp_v3.0_unigene149345 SustainPine v3.0 218
• AutoFact: F1L3.28 n=1 Tax=Arabidopsis thaliana RepID=Q9LNP7_ARATH 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Myosin XI 2.485e-27
Internal
sp_v3.0_unigene149463 SustainPine v3.0 262
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 2.637e-12
C-terminus
sp_v3.0_unigene150007 SustainPine v3.0 147
• AutoFact: Trehalose-6-phosphate synthase n=1 Tax=Ginkgo biloba RepID=Q5D6D9_GINBI 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Trehalose-6-phosphate synthase 3.641e-14
Putative C-terminus
sp_v3.0_unigene150324 SustainPine v3.0 389
• AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 3.279e-08
Putative Complete
sp_v3.0_unigene150350 SustainPine v3.0 325
• AutoFact: ARP2/3 complex 20 kDa subunit [Neurospora crassa OR74A] ref|XP_003349024.1| hypothetical protein SMAC_06801 [Sordaria macrospora k-hell] gb|EAA36313.1| ARP2/3 complex 20 kDa subunit [Neurospora crassa OR74A] emb|CBI54822.1| unnamed protein product [Sordar 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene150431 SustainPine v3.0 392
• AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 3.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 2.9e-08
Putative Complete
sp_v3.0_unigene150757 SustainPine v3.0 184
• AutoFact: NHP2-like protein 1 homolog n=3 Tax=Caenorhabditis RepID=NH2L1_CAEEL 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 2.9e-08
C-terminus
sp_v3.0_unigene151199 SustainPine v3.0 376
• AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 3.279e-08
Putative Complete
sp_v3.0_unigene151400 SustainPine v3.0 391
• AutoFact: PREDICTED: putative actin related protein 2/3 complex subunit 4 n=1 Tax=Taeniopygia guttata RepID=UPI000194D266 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene151530 SustainPine v3.0 398
• AutoFact: actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus (Silurana) tropicalis] ref|NP_001087956.1| actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus laevis] gb|AAH74659.1| actin related protein 2/3 complex, subunit 4, 20kDa [Xenopus (Silur 9.99967e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene152032 SustainPine v3.0 378
• AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 6.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 4.296e-08
N-terminus
sp_v3.0_unigene152190 SustainPine v3.0 326
• AutoFact: Actin related protein 2/3 complex subunit 4 n=1 Tax=Suberites domuncula RepID=A3QX09_SUBDO 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene152906 SustainPine v3.0 413
• AutoFact: Putative DEAD/DEAH box helicase n=1 Tax=Trichinella spiralis RepID=E5SYL4_TRISP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: DEAD-box ATP-dependent RNA helicase 21 1.116e-07
C-terminus
sp_v3.0_unigene153033 SustainPine v3.0 124
• AutoFact: NHP2/L7aE family protein [Neurospora crassa OR74A] ref|XP_003348176.1| hypothetical protein SMAC_04021 [Sordaria macrospora k-hell] emb|CAC18221.2| probable 13 kD U4/U6.U5 snRNP associate protein [Neurospora crassa] gb|EAA32181.1| NHP2/L7aE family protein 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 2.9e-08
Internal
sp_v3.0_unigene153039 SustainPine v3.0 267
• AutoFact: guanine nucleotide-exchange protein GEP2 [Oryza sativa] 4.0e-23
• FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative guanine nucleotide-exchange protein GEP2 1.83e-12
Internal
sp_v3.0_unigene153269 SustainPine v3.0 286
• AutoFact: PREDICTED: similar to hoip-prov protein [Strongylocentrotus purpuratus] ref|XP_001176138.1| PREDICTED: similar to hoip-prov protein [Strongylocentrotus purpuratus] 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NHP2-like protein 1 2.9e-08
Putative C-terminus
sp_v3.0_unigene153553 SustainPine v3.0 304
• AutoFact: PREDICTED: similar to TNP2 n=1 Tax=Vitis vinifera RepID=UPI00019854B7 9.0e-31
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Transposon protein, putative, CACTA, En/Spm sub-class 1.826e-38
Internal
sp_v3.0_unigene153841 SustainPine v3.0 397
• AutoFact: Actin related protein 2/3 complex n=2 Tax=Dictyosteliida RepID=D3BJ37_POLPA 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene153959 SustainPine v3.0 436
• AutoFact: Fumarylacetoacetase n=2 Tax=Salinibacter ruber RepID=Q2S021_SALRD 1.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fumarylacetoacetase 6.635e-09
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain