Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Immunoglobulin/major histocompatibility complex, conserved site

Term: IPR003006  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene15539 SustainPine v3.0 622
• AutoFact: Putative NBS-LRR protein G8029 (Fragment) n=2 Tax=Pinus monticola RepID=Q6WE85_PINMO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene15662 SustainPine v3.0 625
• AutoFact: Integrase n=1 Tax=Silene latifolia RepID=Q8S942_SILLA 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 5.022e-14
C-terminus
sp_v3.0_unigene15688 SustainPine v3.0 587
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 4.269e-09
Putative C-terminus
sp_v3.0_unigene15729 SustainPine v3.0 1533
• AutoFact: Sugar transport protein 7 n=2 Tax=Arabidopsis RepID=STP7_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sugar transporter, putative 2.837e-40
Putative Complete
sp_v3.0_unigene15846 SustainPine v3.0 965
• AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 4.0e-13
• FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: SNF2 family DNA-dependent ATPase 3.618e-06
N-terminus
sp_v3.0_unigene16219 SustainPine v3.0 920
• AutoFact: Ubiquitin specific protease 39 and snrnp assembly factor, putative n=1 Tax=Ricinus communis RepID=B9S3J3_RICCO 0.0
• FL-Next: sp=Putative ubiquitin carboxyl-terminal hydrolase 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene16307 SustainPine v3.0 455
• AutoFact: TIR/NBS (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J1_PINTA 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene16374 SustainPine v3.0 419
• AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative TIR/NBS/LRR disease resistance protein 3.151e-09
Internal
sp_v3.0_unigene16508 SustainPine v3.0 936
• AutoFact: wall-associated receptor kinase-like 20 [Arabidopsis thaliana] sp|Q9LZM4.1|WAKLQ_ARATH RecName: Full=Wall-associated receptor kinase-like 20; Flags: Precursor emb|CAB82980.1| putative protein kinase [Arabidopsis thaliana] gb|AED90428.1| wall-associated re 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative wall-associated kinase 4 1.456e-20
Internal
sp_v3.0_unigene16627 SustainPine v3.0 617
• AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J7_PINTA 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: TIR/NBS 8.285e-06
Internal
sp_v3.0_unigene16642 SustainPine v3.0 601
• AutoFact: PPR-repeat protein-like n=3 Tax=Oryza sativa RepID=Q94E87_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.926e-09
Internal
sp_v3.0_unigene16676 SustainPine v3.0 683
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.287e-15
Internal
sp_v3.0_unigene16686 SustainPine v3.0 264
• AutoFact: ATP/DNA binding protein n=2 Tax=Arabidopsis RepID=Q9M305_ARATH 7.0e-20
• FL-Next: tr=Sacsin; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Internal
sp_v3.0_unigene16867 SustainPine v3.0 939
• AutoFact: WAK-like kinase n=1 Tax=Solanum lycopersicum RepID=Q6QLL5_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Wall-associated kinase, putative 5.933e-14
Internal
sp_v3.0_unigene16977 SustainPine v3.0 1522
• AutoFact: BURP domain-containing protein (Fragment) n=1 Tax=Bruguiera gymnorhiza RepID=Q93XI2_9ROSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr4 scaffold_6, whole genome shotgun sequence 8.834e-18
Complete
sp_v3.0_unigene17109 SustainPine v3.0 1524
• AutoFact: BURP domain-containing protein [Bruguiera gymnorhiza] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: BURP domain-containing protein 3.30706e-43
Complete
sp_v3.0_unigene17265 SustainPine v3.0 2110
• AutoFact: Fumarylacetoacetate hydrolase, putative n=1 Tax=Ricinus communis RepID=B9S3J5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Fumarylacetoacetase 2.662e-13
Complete
sp_v3.0_unigene17321 SustainPine v3.0 934
• AutoFact: Protein GAST1 n=1 Tax=Solanum lycopersicum RepID=GAST1_SOLLC 4.0e-23
• FL-Next: tr=Gasa5 like protein; Pinus pinaster (Maritime pine). 0.0
• Sma3: GAST1 protein 7.71e-15
Putative Complete
sp_v3.0_unigene17484 SustainPine v3.0 2753
• AutoFact: GSK3/shaggy-like protein kinase n=1 Tax=Selaginella moellendorffii RepID=D8SX29_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Glycogen synthase kinase-3 beta, putative 1.759e-16
Complete
sp_v3.0_unigene17895 SustainPine v3.0 1788
• AutoFact: pfam12854, PPR_1, PPR repeat 8.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain