Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Immunoglobulin/major histocompatibility complex, conserved site

Term: IPR003006  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene14356 SustainPine v3.0 962
• AutoFact: C3HC4-type RING finger protein [Arabidopsis thaliana] gb|AEE79284.1| C3HC4-type RING finger protein [Arabidopsis thaliana] 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Inter-alpha-trypsin inhibitor heavy chain H3, putative 4.863e-08
Internal
sp_v3.0_unigene14361 SustainPine v3.0 731
• AutoFact: pathogenesis-related protein 5 [Arabidopsis thaliana] sp|P28493.1|PR5_ARATH RecName: Full=Pathogenesis-related protein 5; Short=PR-5; Flags: Precursor gb|AAG51923.1|AC013258_17 thaumatin-like protein; 25613-24636 [Arabidopsis thaliana] gb|AAA32865.1| thau 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Thaumatin-like protein 0.0
C-terminus
sp_v3.0_unigene14473 SustainPine v3.0 467
• AutoFact: Os07g0106200 protein n=4 Tax=Oryza sativa RepID=Q7EZD7_ORYSJ 4.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Sugar transporter, putative 9.11264e-42
Internal
sp_v3.0_unigene14568 SustainPine v3.0 3986
• AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9SZS0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potassium transporter, putative 1.429e-32
Putative Complete
sp_v3.0_unigene14577 SustainPine v3.0 1283
• AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative pentatricopeptide (PPR) repeat-containing protein 9.517e-14
Putative Complete
sp_v3.0_unigene14578 SustainPine v3.0 435
• AutoFact: SEC7-like guanine nucleotide exchange protein [Arabidopsis thaliana] gb|AAF76474.1|AC020622_8 Contains similarity to a guanine nucleotide exchange factor from Homo sapiens gb|AF111162 and contains a Sec7 PF|01369 domain [Arabidopsis thaliana] gb|AEE27360. 9.99967e-42
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene14581 SustainPine v3.0 672
• AutoFact: TIR/NBS (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J1_PINTA 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Putative TIR/NBS/LRR disease resistance protein 6.229e-09
N-terminus
sp_v3.0_unigene14680 SustainPine v3.0 234
• AutoFact: FAP multi-domain protein 1.0e-10
• Sma3: Putative glycine-rich cell wall structural protein 1.383e-10
unknown
sp_v3.0_unigene14686 SustainPine v3.0 286
• AutoFact: pfam01535, PPR, PPR repeat 9.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 8.376e-20
Internal
sp_v3.0_unigene14778 SustainPine v3.0 822
• AutoFact: Os01g0689900 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q5N7Q8_ORYSJ 0.0
• FL-Next: tr=Uncharacterized protein; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). 0.0
• Sma3: Wall-associated kinase, putative 2.254e-21
Putative C-terminus
sp_v3.0_unigene14793 SustainPine v3.0 525
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene14847 SustainPine v3.0 478
• AutoFact: Putative NBS-LRR protein G8029 (Fragment) n=2 Tax=Pinus monticola RepID=Q6WE85_PINMO 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: NBS/LRR 2.578e-08
C-terminus
sp_v3.0_unigene14854 SustainPine v3.0 2102
• AutoFact: Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana] gb|AEE34977.1| Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene14859 SustainPine v3.0 1309
• AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RUB7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Potassium transporter, putative 3.50325e-44
N-terminus
sp_v3.0_unigene14954 SustainPine v3.0 513
• AutoFact: TIR/NBS (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8J1_PINTA 8.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene15034 SustainPine v3.0 627
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.887e-12
N-terminus
sp_v3.0_unigene15135 SustainPine v3.0 246
• AutoFact: putative receptor-like protein kinase 2 [Oryza sativa Japonica Group] 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Receptor protein kinase-like 1.858e-14
Internal
sp_v3.0_unigene15141 SustainPine v3.0 591
• AutoFact: protein kinase family protein [Arabidopsis thaliana] dbj|BAB02454.1| unnamed protein product [Arabidopsis thaliana] gb|AAU94380.1| At3g19300 [Arabidopsis thaliana] gb|AAV59270.1| At3g19300 [Arabidopsis thaliana] gb|AEE76221.1| protein kinase family protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Kinase, putative 1.596e-09
Internal
sp_v3.0_unigene15148 SustainPine v3.0 1886
• AutoFact: Amino acid/polyamine transporter II [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Amino acid transporter 3.818e-21
Complete
sp_v3.0_unigene15413 SustainPine v3.0 1705
• AutoFact: trichome birefringence-like 45 protein [Arabidopsis thaliana] gb|AAL16254.1|AF428324_1 At2g30010/F23F1.7 [Arabidopsis thaliana] gb|AAC31851.1| expressed protein [Arabidopsis thaliana] gb|AAV85725.1| At2g30010 [Arabidopsis thaliana] gb|AEC08335.1| trichome 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Lustrin A-like 7.326e-14
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain