Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Radical SAM

Term: IPR007197  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene72789 SustainPine v3.0 232
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene73789 SustainPine v3.0 438
AutoFact: Molybdenum cofactor synthesis-step 1 protein isoform 2 n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=D6RK51_COPC7 2.0e-32
FL-Next: sp=Molybdopterin biosynthesis protein CNX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
sp_v3.0_unigene74318 SustainPine v3.0 349
AutoFact: (dimethylallyl)adenosine tRNA methylthiotransferase [Trichodesmium erythraeum IMS101] sp|Q119H9.1|MIAB_TRIEI RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gb|ABG49845.1| tRNA-i(6)A 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Chlorella variabilis (Green alga). 0.0
C-terminus
sp_v3.0_unigene75526 SustainPine v3.0 297
AutoFact: DUF248 domain containing protein 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 5.304e-09
Internal
sp_v3.0_unigene76490 SustainPine v3.0 333
AutoFact: [H] COG2896 Molybdenum cofactor biosynthesis enzyme 8.0e-23
FL-Next: sp=Molybdopterin biosynthesis protein CNX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene76688 SustainPine v3.0 399
AutoFact: Unassigned protein 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene77022 SustainPine v3.0 183
AutoFact: Lipoyl synthase, mitochondrial n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=LIPA_COPC7 7.0e-26
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipoic acid synthase 2.404e-16
Internal
sp_v3.0_unigene77224 SustainPine v3.0 330
AutoFact: Lipoyl synthase, mitochondrial n=2 Tax=Pyrenophora RepID=LIPA_PYRTR 0.0
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipoic acid synthase 2.655e-12
C-terminus
sp_v3.0_unigene77946 SustainPine v3.0 257
AutoFact: Radical SAM domain protein (Fragment) n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5G0_ACIDE 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Chlorella variabilis (Green alga). 0.0
Internal
sp_v3.0_unigene79105 SustainPine v3.0 491
AutoFact: Biotin synthase n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KIF2_PUCGT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Biotin synthase 6.29e-15
Internal
sp_v3.0_unigene96342 SustainPine v3.0 428
AutoFact: FO synthase [Rhodopseudomonas palustris HaA2] gb|ABD09109.1| FO synthase subunit 2 / FO synthase subunit 1 [Rhodopseudomonas palustris HaA2] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene100198 SustainPine v3.0 901
AutoFact: oxygen-independent coproporphyrinogen III oxidase [Arabidopsis thaliana] dbj|BAB10571.1| oxygen-independent coproporphyrinogen-like protein [Arabidopsis thaliana] gb|ABI93924.1| At5g63290 [Arabidopsis thaliana] gb|AED97728.1| oxygen-independent coproporph 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene102475 SustainPine v3.0 718
AutoFact: UPF0004 domain containing protein 1.0e-27
FL-Next: sp=CDK5RAP1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: CDK5RAP1-like protein 3.06e-09
Putative N-terminus
sp_v3.0_unigene108600 SustainPine v3.0 374
AutoFact: Molybdopterin cofactor synthesis protein A, putative n=1 Tax=Ricinus communis RepID=B9REL9_RICCO 9.0e-13
FL-Next: sp=Molybdopterin biosynthesis protein CNX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene120862 SustainPine v3.0 576
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S2Q5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ankyrin-like protein 6.791e-16
Internal
sp_v3.0_unigene130501 SustainPine v3.0 426
AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAO41968.1| unknown protein [Arabidopsis thaliana] gb|AAO50541.1| unknown protein [Arabidopsis thaliana] gb|AEE76269.1| radical SAM domain-containing protein [Arabidopsis thaliana] 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene131300 SustainPine v3.0 309
AutoFact: Catalytic, putative n=1 Tax=Ricinus communis RepID=B9RUU0_RICCO 4.0e-35
FL-Next: tr=Catalytic, putative; Ricinus communis (Castor bean). 0.0
Sma3: Catalytic, putative 4.528e-06
Internal
sp_v3.0_unigene132934 SustainPine v3.0 309
AutoFact: putative molybdenum cofactor biosynthesis protein A [Oryza sativa Japonica Group] dbj|BAD20110.1| putative molybdenum cofactor biosynthesis protein A [Oryza sativa Japonica Group] 1.0e-39
FL-Next: sp=Molybdopterin biosynthesis protein CNX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene149244 SustainPine v3.0 198
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9R995_RICCO 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 1.554e-24
Internal
sp_v3.0_unigene152167 SustainPine v3.0 296
AutoFact: Lipoyl synthase, mitochondrial n=2 Tax=Nectriaceae RepID=LIPA_NECH7 4.99997e-41
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Lipoic acid synthetase 5.643e-16
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain