Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Cystathionine beta-synthase, core

Term: IPR000644  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene214 SustainPine v3.0 1512
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene530 SustainPine v3.0 2076
AutoFact: Magnesium and cobalt efflux protein corC, putative n=1 Tax=Ricinus communis RepID=B9T467_RICCO 0.0
FL-Next: sp=DUF21 domain-containing protein At1g55930, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene1026 SustainPine v3.0 1947
AutoFact: Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana] gb|AEE34977.1| Cystathionine beta-synthase (CBS) protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene1044 SustainPine v3.0 1528
AutoFact: CBS domain-containing protein [Arabidopsis thaliana] sp|Q8GZA4.1|CBSX6_ARATH RecName: Full=CBS domain-containing protein CBSX6 dbj|BAC41791.1| unknown protein [Arabidopsis thaliana] gb|AEE34358.1| CBS domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=CBS domain-containing protein CBSX6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Complete
sp_v3.0_unigene2116 SustainPine v3.0 1520
AutoFact: DUF248 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ankyrin-like protein 1.256e-18
C-terminus
sp_v3.0_unigene2453 SustainPine v3.0 3266
AutoFact: [R] COG0517 FOG: CBS domain 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene2631 SustainPine v3.0 3138
AutoFact: cytochrome P450, putative (EC:1.6.2.4) 0.0
FL-Next: sp=tRNA wybutosine-synthesizing protein 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: tRNA wybutosine-synthesizing protein 1 homolog 7.149e-09
Complete
sp_v3.0_unigene3042 SustainPine v3.0 5664
AutoFact: Replication factor C / DNA polymerase III gamma-tau subunit, putative n=1 Tax=Ricinus communis RepID=B9S048_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Replication factor C / DNA polymerase III gamma-tau subunit, putative 3.027e-14
Complete
sp_v3.0_unigene3063 SustainPine v3.0 2734
AutoFact: Chloride channel protein n=1 Tax=Citrus trifoliata RepID=D5LM39_PONTR 0.0
FL-Next: sp=Chloride channel protein CLC-c; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cl-channel clc-7 7.165e-20
Complete
sp_v3.0_unigene3723 SustainPine v3.0 3267
AutoFact: Cl-channel clc-7 n=2 Tax=Populus trichocarpa RepID=B9N0H5_POPTR 0.0
FL-Next: sp=Putative chloride channel-like protein CLC-g; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cl-channel clc-7 7.488e-20
Complete
sp_v3.0_unigene3757 SustainPine v3.0 3511
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP binding protein, putative 6.895e-24
Complete
sp_v3.0_unigene3994 SustainPine v3.0 849
AutoFact: H(+)/Cl(-) exchange transporter 7 [Danio rerio] gb|AAI25874.1| Chloride channel 7 [Danio rerio] gb|AAI65222.1| Clcn7 protein [Danio rerio] 8.0e-36
FL-Next: sp=Chloride channel protein CLC-a; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chloride Carrier/Channel family 1.865e-08
Internal
sp_v3.0_unigene4694 SustainPine v3.0 404
AutoFact: chloride channel protein CLC-e [Arabidopsis thaliana] sp|Q8GX93.2|CLCE_ARATH RecName: Full=Chloride channel protein CLC-e; Short=AtCLC-e gb|AEE86510.1| chloride channel protein CLC-e [Arabidopsis thaliana] 4.0e-23
FL-Next: sp=Chloride channel protein CLC-e; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Voltage-gated clc-type chloride channel, putative 2.807e-08
Internal
sp_v3.0_unigene5496 SustainPine v3.0 2961
AutoFact: sucrose nonfermenting 4-like protein [Arabidopsis thaliana] gb|AAL27498.1|AF439826_1 At1g09020/F7G19_11 [Arabidopsis thaliana] gb|AAN18191.1| At1g09020/F7G19_11 [Arabidopsis thaliana] gb|ABA12450.1| AKINbetagamma [Arabidopsis thaliana] gb|AEE28383.1| sucr 0.0
FL-Next: sp=Sucrose nonfermenting 4-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: SNF4 5.208e-09
Complete
sp_v3.0_unigene5713 SustainPine v3.0 1997
AutoFact: Inosine-5'-monophosphate dehydrogenase n=1 Tax=Picea sitchensis RepID=B8LQF1_PICSI 0.0
FL-Next: sp=Inosine-5'-monophosphate dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene5784 SustainPine v3.0 1853
AutoFact: sugar isomerase domain-containing protein [Arabidopsis thaliana] emb|CAB77589.1| sugar-phosphate isomerase-like protein [Arabidopsis thaliana] dbj|BAE99073.1| sugar-phosphate isomerase - like protein [Arabidopsis thaliana] gb|AEE79267.1| sugar isomerase d 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene6008 SustainPine v3.0 1663
AutoFact: Cysteine synthase n=3 Tax=Oryza sativa RepID=Q5Z8Y9_ORYSJ 0.0
FL-Next: sp=Cysteine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Cysteine synthase 0.0
Complete
sp_v3.0_unigene6154 SustainPine v3.0 1518
AutoFact: Coiled-coil domain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SCZ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein At2g27280 5.819e-10
Complete
sp_v3.0_unigene6250 SustainPine v3.0 2216
AutoFact: Arabidopsis thaliana CLC-d chloride channel protein (GB:Z71450) 0.0
FL-Next: sp=Chloride channel protein CLC-d; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cl-channel clc-7 4.802e-20
Putative C-terminus
sp_v3.0_unigene6418 SustainPine v3.0 2247
AutoFact: CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] ref|NP_001190074.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein [Arabidopsis thaliana] emb|CAB86899.1| putative protein [Arabidopsis thaliana] gb|AEE79016.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Emb|CAB86899.1 6.823e-09
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain