Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC-2 type transporter

Term: IPR013525  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene63770 SustainPine v3.0 239
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RQF2_RICCO 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Putative C-terminus
sp_v3.0_unigene63956 SustainPine v3.0 241
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9S9X8_RICCO 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: White-brown-complex ABC transporter family 1.637e-24
Internal
sp_v3.0_unigene64298 SustainPine v3.0 210
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty1-copia subclass 2.68e-12
Internal
sp_v3.0_unigene64560 SustainPine v3.0 228
• AutoFact: rve domain containing protein 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene64714 SustainPine v3.0 259
• AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8SJZ1_SELML 6.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene64731 SustainPine v3.0 289
• AutoFact: Pleiotropic drug resistance protein n=1 Tax=Cucumis sativus RepID=C8CA12_CUCSA 1.0e-27
• FL-Next: sp=Pleiotropic drug resistance protein 15; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene64936 SustainPine v3.0 335
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 3.0e-22
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v3.0_unigene66478 SustainPine v3.0 387
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.105e-11
N-terminus
sp_v3.0_unigene66516 SustainPine v3.0 362
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RJZ3_RICCO 1.00053e-42
• FL-Next: sp=ABC transporter G family member 34; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene66778 SustainPine v3.0 415
• AutoFact: ATP-binding cassette transporter n=1 Tax=Selaginella moellendorffii RepID=D8SQ66_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene66904 SustainPine v3.0 369
• AutoFact: PDR-like ABC transporter [Nicotiana tabacum] 5.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pleiotropic drug resistance protein 1 1.767e-08
Internal
sp_v3.0_unigene67112 SustainPine v3.0 340
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SSW1_RICCO 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Putative N-terminus
sp_v3.0_unigene67147 SustainPine v3.0 300
• AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, unclassified 1.396e-08
Internal
sp_v3.0_unigene67193 SustainPine v3.0 325
• AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9RJZ5_RICCO 5.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: PDR-like ABC-transporter 5.361e-06
Internal
sp_v3.0_unigene67324 SustainPine v3.0 316
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene67339 SustainPine v3.0 359
• AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 7.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Copia-type polyprotein 1.482e-11
C-terminus
sp_v3.0_unigene67589 SustainPine v3.0 283
• AutoFact: ATP-binding cassette transporter n=1 Tax=Selaginella moellendorffii RepID=D8RL93_SELML 2.0e-22
• FL-Next: sp=Putative pleiotropic drug resistance protein 7; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: ATP-binding cassette transporter, putative 4.222e-25
Internal
sp_v3.0_unigene67727 SustainPine v3.0 335
• AutoFact: RecName: Full=Pleiotropic drug resistance protein 1; AltName: Full=NtPDR1 dbj|BAD07483.1| PDR-type ABC transporter 1 [Nicotiana tabacum] 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 0.0
Putative C-terminus
sp_v3.0_unigene67776 SustainPine v3.0 245
• AutoFact: ABC transporter G family member 36 n=5 Tax=Brassicaceae RepID=AB36G_ARATH 4.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: ATP-binding cassette transporter, putative 1.772e-21
Internal
sp_v3.0_unigene68318 SustainPine v3.0 288
• AutoFact: ATP-binding cassette sub-family G member 2 1.0e-05
• FL-Next: sp=ABC transporter G family member 11; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: White-brown-complex ABC transporter family 5.119e-14
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain