Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: ABC-2 type transporter

Term: IPR013525  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene165789 SustainPine v3.0 296
AutoFact: Putative polyprotein n=2 Tax=Oryza sativa Japonica Group RepID=Q851Y3_ORYSJ 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165801 SustainPine v3.0 446
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 9.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 3.316e-12
Internal
sp_v3.0_unigene165858 SustainPine v3.0 537
AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.208e-17
Internal
sp_v3.0_unigene166168 SustainPine v3.0 392
AutoFact: ATP-binding cassette transporter, subfamily G, member 22, group PDR protein PpABCG22 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYR6_PHYPA 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 1.687e-39
Internal
sp_v3.0_unigene166981 SustainPine v3.0 452
AutoFact: ABC transporter G-24 [Arabidopsis thaliana] sp|Q9MAG3.2|AB24G_ARATH RecName: Full=ABC transporter G family member 24; Short=ABC transporter ABCG.24; Short=AtABCG24; AltName: Full=Probable white-brown complex homolog protein 25; Short=AtWBC25 gb|AEE32936.1 8.0e-30
FL-Next: sp=ABC transporter G family member 24; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: White-brown-complex ABC transporter family 2.292e-13
Internal
sp_v3.0_unigene167139 SustainPine v3.0 264
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SSW1_RICCO 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene167162 SustainPine v3.0 291
AutoFact: ATP-binding cassette transporter, putative n=1 Tax=Ricinus communis RepID=B9SSW1_RICCO 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
Putative N-terminus
sp_v3.0_unigene168002 SustainPine v3.0 296
AutoFact: Unassigned protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene168038 SustainPine v3.0 353
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 6.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.503e-15
Internal
sp_v3.0_unigene168128 SustainPine v3.0 256
AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 5.061e-11
Internal
sp_v3.0_unigene180989 SustainPine v3.0 433
Sma3: ATP-binding cassette transporter, putative 0.0
putative_coding
sp_v3.0_unigene183790 SustainPine v3.0 709
AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 7.00649e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 9.101e-11
Putative C-terminus
sp_v3.0_unigene184262 SustainPine v3.0 626
AutoFact: Integrase n=2 Tax=Beta vulgaris RepID=A2I5F8_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, unclassified 3.667e-27
Putative C-terminus
sp_v3.0_unigene184647 SustainPine v3.0 268
AutoFact: RecName: Full=Pleiotropic drug resistance protein 2; AltName: Full=NpPDR2 emb|CAH40786.1| PDR-like ABC transporter [Nicotiana plumbaginifolia] 2.0e-32
FL-Next: sp=Pleiotropic drug resistance protein 2; Nicotiana plumbaginifolia (Leadwort-leaved tobacco) (Tex-Mex tobacco). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
Internal
sp_v3.0_unigene185087 SustainPine v3.0 795
AutoFact: Copia-type polyprotein, putative n=4 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Copia-type polyprotein 6.499e-11
C-terminus
sp_v3.0_unigene185621 SustainPine v3.0 241
AutoFact: ATP-binding cassette transporter, subfamily G, member 22, group PDR protein PpABCG22 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYR6_PHYPA 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pleiotropic drug resistance protein 1 7.93e-09
Internal
sp_v3.0_unigene186788 SustainPine v3.0 261
AutoFact: Unassigned protein 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene186945 SustainPine v3.0 201
AutoFact: White-brown-complex ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9HM23_POPTR 2.0e-11
FL-Next: sp=ABC transporter G family member 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: White-brown-complex ABC transporter family 1.98e-08
C-terminus
sp_v3.0_unigene187410 SustainPine v3.0 370
AutoFact: hydroquinone glucosyltransferase [Arabidopsis thaliana] sp|Q9M156.1|U72B1_ARATH RecName: Full=UDP-glycosyltransferase 72B1; AltName: Full=Arbutin synthase; AltName: Full=Probable hydroquinone glucosyltransferase pdb|2VCE|A Chain A, Characterization And En 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_91, whole genome shotgun sequence 3.499e-11
Putative C-terminus
sp_v3.0_unigene188281 SustainPine v3.0 506
AutoFact: Putative pleiotropic drug resistance protein 7 n=6 Tax=Poaceae RepID=PDR7_ORYSJ 5.0e-22
FL-Next: sp=Putative pleiotropic drug resistance protein 7; Oryza sativa subsp. japonica (Rice). 0.0
Sma3: ATP-binding cassette transporter, putative 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain