Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: CTLH, C-terminal LisH motif

Term: IPR006595  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene146854 SustainPine v3.0 473
• AutoFact: Os01g0254100 protein n=2 Tax=Oryza sativa RepID=Q5NBT9_ORYSJ 8.0e-12
• FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: Putative CTV.2 8.285e-06
Internal
sp_v3.0_unigene146857 SustainPine v3.0 517
• AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 1.0e-14
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene146860 SustainPine v3.0 885
• AutoFact: Topless-related protein 1 [Arabidopsis thaliana] sp|Q0WV90.3|TPR1_ARATH RecName: Full=Topless-related protein 1; AltName: Full=Protein MODIFIER OF SNC1 10 gb|AEE36412.1| Topless-related protein 1 [Arabidopsis thaliana] 0.0
• FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 2.093e-09
Internal
sp_v3.0_unigene146865 SustainPine v3.0 673
• AutoFact: Unassigned protein
• FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 2.361e-09
Internal
sp_v3.0_unigene146868 SustainPine v3.0 520
• AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 2.0e-09
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene146877 SustainPine v3.0 328
• AutoFact: Unassigned protein
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene146880 SustainPine v3.0 744
• AutoFact: Topless-related protein 2 n=2 Tax=Arabidopsis RepID=TPR2_ARATH 5.0e-40
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 3.297e-07
Internal
sp_v3.0_unigene146902 SustainPine v3.0 502
• AutoFact: Unassigned protein
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Sma3: WD-repeat protein, putative 6.02e-12
Internal
sp_v3.0_unigene146905 SustainPine v3.0 292
• AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 2.0e-13
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene146920 SustainPine v3.0 448
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 6.0e-23
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.882e-09
Internal
sp_v3.0_unigene146952 SustainPine v3.0 282
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SMF9_RICCO 7.0e-12
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: WD-repeat protein, putative 1.292e-09
Internal
sp_v3.0_unigene148141 SustainPine v3.0 264
• AutoFact: Sucrose_synth domain containing protein 4.0e-12
• FL-Next: tr=Sucrose synthase; Pinus taeda (Loblolly pine). 0.0
Internal
sp_v3.0_unigene148230 SustainPine v3.0 228
• AutoFact: Topless-related 2 protein [Arabidopsis thaliana] sp|Q9LRZ0.2|TPR2_ARATH RecName: Full=Topless-related protein 2 gb|AEE75871.1| Topless-related 2 protein [Arabidopsis thaliana] 4.0e-13
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene158452 SustainPine v3.0 291
• AutoFact: catabolite degradation protein [Aspergillus fumigatus Af293] gb|EAL86064.1| catabolite degradation protein, putative [Aspergillus fumigatus Af293] 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: WD-repeat protein-like 1.167e-07
C-terminus
sp_v3.0_unigene158988 SustainPine v3.0 414
• AutoFact: Unassigned protein
• FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene161708 SustainPine v3.0 172
• AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 5.0e-08
• FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
sp_v3.0_unigene163896 SustainPine v3.0 299
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene164033 SustainPine v3.0 123
• AutoFact: Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like n=1 Tax=Medicago truncatula RepID=Q2HW32_MEDTR 1.0e-07
• FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene165807 SustainPine v3.0 188
• AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 8.0e-12
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene184194 SustainPine v3.0 1239
• AutoFact: LisH and RanBPM domain-containing protein [Arabidopsis thaliana] gb|AAO24554.1| At1g61150 [Arabidopsis thaliana] dbj|BAF00099.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33789.1| LisH and RanBPM domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Uncharacterized protein; Lotus japonicus (Lotus corniculatus var. japonicus). 0.0
• Sma3: Putative uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain