Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Protein of unknown function DUF1675

Term: IPR012463  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene925 SustainPine v3.0 2574
AutoFact: Ninja-family protein AFP3 [Arabidopsis thaliana] ref|NP_001030794.1| Ninja-family protein AFP3 [Arabidopsis thaliana] ref|NP_001078222.1| Ninja-family protein AFP3 [Arabidopsis thaliana] sp|Q94F39.1|AFP3_ARATH RecName: Full=Ninja-family protein AFP3; AltN 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene2153 SustainPine v3.0 2798
AutoFact: AFP-like protein 2 [Arabidopsis thaliana] ref|NP_849467.1| AFP-like protein 2 [Arabidopsis thaliana] ref|NP_001078466.1| AFP-like protein 2 [Arabidopsis thaliana] sp|Q9SV55.1|NINJA_ARATH RecName: Full=AFP homolog 2; AltName: Full=Ninja-family protein At4g 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene5369 SustainPine v3.0 2652
AutoFact: DUF1675 multi-domain protein 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene23831 SustainPine v3.0 2375
AutoFact: putative Ras-GTPase-activating protein binding protein 1 [Oryza sativa Japonica Group] dbj|BAG91794.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RNA-binding protein-like 2.135e-09
Complete
sp_v3.0_unigene28227 SustainPine v3.0 2169
AutoFact: Ninja-family protein AFP3 n=1 Tax=Arabidopsis thaliana RepID=AFP3_ARATH 6.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
sp_v3.0_unigene55540 SustainPine v3.0 318
AutoFact: pfam00665, rve, Integrase core domain 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 7.377e-08
Internal
sp_v3.0_unigene61982 SustainPine v3.0 305
AutoFact: RVT_2 domain containing protein 5.0e-06
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 4.828e-17
Internal
sp_v3.0_unigene62743 SustainPine v3.0 304
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RLM4_RICCO 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-GTPase-activating protein-binding protein, putative 2.941e-12
Internal
sp_v3.0_unigene100826 SustainPine v3.0 627
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB09056.1| unnamed protein product [Arabidopsis thaliana] gb|AAL86001.1| unknown protein [Arabidopsis thaliana] gb|AAM45065.1| unknown protein [Arab 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ras-GTPase-activating protein-binding protein, putative 1.919e-12
N-terminus
sp_v3.0_unigene105984 SustainPine v3.0 371
AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 2.05e-07
Internal
sp_v3.0_unigene140551 SustainPine v3.0 926
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] gb|AED97406.1| nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: RNA-binding protein-like 4.062e-09
Putative N-terminus
sp_v3.0_unigene144203 SustainPine v3.0 518
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 3.284e-31
Internal
sp_v3.0_unigene161497 SustainPine v3.0 247
AutoFact: Gag-protease-integrase-RT-RNaseH polyprotein n=1 Tax=Glycine max RepID=B5U9F7_SOYBN 2.0e-35
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Sma3: Transposon protein, putative, unclassified 7.069e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain