Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: TRAF-type

Term: IPR013322  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene94611 SustainPine v3.0 482
AutoFact: Unassigned protein
FL-Next: sp=MATH domain-containing protein At5g43560; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene94792 SustainPine v3.0 545
AutoFact: ubiquitin ligase SINAT5-related (seven in absentia protein family) [Musa balbisiana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SINA6 1.352e-07
C-terminus
sp_v3.0_unigene95712 SustainPine v3.0 517
AutoFact: MATH domain containing protein 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene96676 SustainPine v3.0 961
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Speckle-type POZ protein, putative 5.849e-15
N-terminus
sp_v3.0_unigene101920 SustainPine v3.0 316
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9P2L6_PICSI 9.0e-37
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 0.0
Internal
sp_v3.0_unigene102492 SustainPine v3.0 698
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin ligase SINAT2, putative 1.564e-07
Putative N-terminus
sp_v3.0_unigene104413 SustainPine v3.0 667
AutoFact: Ubiquitin specific protease 12 n=1 Tax=Nicotiana tabacum RepID=B6V765_TOBAC 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 9.986e-07
Internal
sp_v3.0_unigene105020 SustainPine v3.0 374
AutoFact: Pectinesterase n=2 Tax=Oryza sativa RepID=B8BBW3_ORYSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Pectinesterase 1.4013e-44
Internal
sp_v3.0_unigene108389 SustainPine v3.0 556
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 4.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 1.022e-06
Putative Complete
sp_v3.0_unigene109932 SustainPine v3.0 106
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 9.0e-05
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
Internal
sp_v3.0_unigene110511 SustainPine v3.0 126
unknown
sp_v3.0_unigene112034 SustainPine v3.0 291
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene113541 SustainPine v3.0 129
AutoFact: CGS1 mRNA stability 1 n=2 Tax=Arabidopsis thaliana RepID=Q0KKQ1_ARATH 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene114923 SustainPine v3.0 676
AutoFact: TRAF-like protein [Arabidopsis thaliana] dbj|BAF03523.1| CGS1 mRNA stability 1 [Arabidopsis thaliana] gb|AEC07688.1| TRAF-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene116062 SustainPine v3.0 492
AutoFact: TRAF-like protein [Arabidopsis thaliana] dbj|BAF03523.1| CGS1 mRNA stability 1 [Arabidopsis thaliana] gb|AEC07688.1| TRAF-like protein [Arabidopsis thaliana] 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene124647 SustainPine v3.0 252
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene125383 SustainPine v3.0 405
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene128050 SustainPine v3.0 719
AutoFact: putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 5.848e-07
Internal
sp_v3.0_unigene129200 SustainPine v3.0 699
AutoFact: putative mitochondrial aldehyde dehydrogenase [Populus x canadensis] 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Aldehyde dehydrogenase 2.332e-22
N-terminus
sp_v3.0_unigene130720 SustainPine v3.0 361
AutoFact: Aldehyde dehydrogenase ALDH2b n=4 Tax=Poaceae RepID=Q9FRX7_ORYSJ 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Aldehyde dehydrogenase 8.1e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain