Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: TRAF-type

Term: IPR013322  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene35036 SustainPine v3.0 1296
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative uncharacterized protein 0.0
Complete
sp_v3.0_unigene48451 SustainPine v3.0 159
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene55262 SustainPine v3.0 487
AutoFact: Myosin_tail_1 domain containing protein 3.0e-06
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene55647 SustainPine v3.0 184
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 7.0e-08
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 7.073e-07
Internal
sp_v3.0_unigene58745 SustainPine v3.0 238
AutoFact: putative ubiquitin protease [Oryza sativa Indica Group] 2.0e-18
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 7.14e-07
Internal
sp_v3.0_unigene59658 SustainPine v3.0 238
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 2.0e-27
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 9.059e-07
Internal
sp_v3.0_unigene63464 SustainPine v3.0 124
AutoFact: putative ubiquitin protease [Oryza sativa Indica Group] 2.0e-09
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 2.313e-07
Internal
sp_v3.0_unigene64230 SustainPine v3.0 283
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene64780 SustainPine v3.0 204
AutoFact: E3 ubiquitin-protein ligase SINAT5 n=1 Tax=Arabidopsis thaliana RepID=SINA5_ARATH 4.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome undetermined scaffold_203, whole genome shotgun sequence 1.173e-08
Internal
sp_v3.0_unigene64909 SustainPine v3.0 207
AutoFact: MATH domain-containing protein [Arabidopsis thaliana] gb|AEE27682.1| MATH domain-containing protein [Arabidopsis thaliana] 3.0e-08
FL-Next: sp=MATH domain-containing protein At5g43560; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene68272 SustainPine v3.0 275
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 9.0e-05
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
N-terminus
sp_v3.0_unigene70821 SustainPine v3.0 337
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 1.00053e-42
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase 3.082e-09
Internal
sp_v3.0_unigene71600 SustainPine v3.0 159
AutoFact: ubiquitin ligase SINAT5-related (seven in absentia protein family) [Musa balbisiana] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: SINA6 1.1e-07
Internal
sp_v3.0_unigene72411 SustainPine v3.0 209
AutoFact: BTB/POZ and M2 domain-containing protein [Arabidopsis thaliana] sp|Q9M8J9.1|BPM2_ARATH RecName: Full=BTB/POZ and MATH domain-containing protein 2; AltName: Full=Protein BTB-POZ AND MATH DOMAIN 2; Short=AtBPM2 gb|AAF30312.1|AC018907_12 unknown protein [Ara 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Speckle-type POZ protein, putative 6.527e-12
Internal
sp_v3.0_unigene74063 SustainPine v3.0 363
AutoFact: Ubiquitin carboxyl-terminal hydrolase 7 n=1 Tax=Camponotus floridanus RepID=E2B1Q7_9HYME 0.0
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
Sma3: Ubiquitin carboxyl-terminal hydrolase, putative 8.25e-07
Internal
sp_v3.0_unigene74451 SustainPine v3.0 210
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene74602 SustainPine v3.0 345
AutoFact: TRAF-like protein [Arabidopsis thaliana] dbj|BAF03523.1| CGS1 mRNA stability 1 [Arabidopsis thaliana] gb|AEC07688.1| TRAF-like protein [Arabidopsis thaliana] 4.00001e-41
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene77229 SustainPine v3.0 115
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Internal
sp_v3.0_unigene79999 SustainPine v3.0 270
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene81699 SustainPine v3.0 405
AutoFact: TRAF-like protein [Arabidopsis thaliana] dbj|BAF03523.1| CGS1 mRNA stability 1 [Arabidopsis thaliana] gb|AEC07688.1| TRAF-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain