Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Chitin-binding, type 1, conserved site

Term: IPR018371  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene40348 SustainPine v3.0 588
AutoFact: Glycoside hydrolase, family 19 n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08VR7_STIAD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene43253 SustainPine v3.0 119
AutoFact: FAP multi-domain protein 2.0e-05
unknown
sp_v3.0_unigene51486 SustainPine v3.0 392
AutoFact: Class IV chitinase Chi4c (Fragment) n=1 Tax=Picea abies RepID=Q4VSV0_PICAB 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Class I chitinase 1.504e-23
Putative N-terminus
sp_v3.0_unigene56017 SustainPine v3.0 456
AutoFact: Class IV chitinase n=7 Tax=Pinaceae RepID=C3VP99_PSEMZ 2.0e-27
FL-Next: tr=Class IV chitinase; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Sma3: Chromosome chr5 scaffold_72, whole genome shotgun sequence 2.664e-14
Putative N-terminus
sp_v3.0_unigene58649 SustainPine v3.0 274
AutoFact: Chitinase n=4 Tax=Eumusa RepID=B6UYK6_MUSPR 4.0e-10
FL-Next: tr=Class I chitinase; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Sma3: Class I chitinase 2.59941e-42
N-terminus
sp_v3.0_unigene61701 SustainPine v3.0 358
AutoFact: class II chitinase [Picea abies] 0.0
FL-Next: tr=Pschi4; Pinus strobus (Eastern white pine). 0.0
Sma3: Chitinase 0.0
Internal
sp_v3.0_unigene68339 SustainPine v3.0 296
AutoFact: Class II chitinase 2-3 n=1 Tax=Pseudotsuga menziesii RepID=D7P706_PSEMZ 2.0e-37
FL-Next: tr=Class VII chitinase; Picea engelmannii x Picea glauca. 0.0
Sma3: Class IV chitinase 4.953e-32
Putative C-terminus
sp_v3.0_unigene68374 SustainPine v3.0 350
AutoFact: Class IV chitinase n=7 Tax=Pinaceae RepID=C3VP99_PSEMZ 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Class IV chitinase 1.052e-22
C-terminus
sp_v3.0_unigene69134 SustainPine v3.0 297
AutoFact: Class IV chitinase n=7 Tax=Pinaceae RepID=C3VP99_PSEMZ 8.0e-14
FL-Next: tr=Class IV chitinase; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Sma3: Class IV chitinase 1.433e-13
N-terminus
sp_v3.0_unigene69661 SustainPine v3.0 190
AutoFact: Class II chitinase 2-1 n=1 Tax=Pseudotsuga menziesii RepID=D7P704_PSEMZ 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Class IV chitinase 8.662e-29
Internal
sp_v3.0_unigene70625 SustainPine v3.0 260
AutoFact: Class IV chitinase 4-5 n=2 Tax=Pseudotsuga menziesii RepID=D7P711_PSEMZ 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Class IV chitinase 2.158e-19
C-terminus
sp_v3.0_unigene72514 SustainPine v3.0 409
AutoFact: chitinase a 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chitinase 0.0
C-terminus
sp_v3.0_unigene73491 SustainPine v3.0 216
AutoFact: Class IV chitinase Ab n=3 Tax=Pinus monticola RepID=Q596H7_PINMO 2.0e-16
FL-Next: tr=Class IV chitinase A; Pinus monticola (Western white pine) (Strobus monticola). 0.0
Sma3: Putative class IV chitinase 1.86e-08
C-terminus
sp_v3.0_unigene74293 SustainPine v3.0 377
AutoFact: Class II chitinase n=3 Tax=Picea RepID=Q6E6M9_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chitinase 0.0
Internal
sp_v3.0_unigene74876 SustainPine v3.0 363
AutoFact: Class II chitinase 2-2 n=1 Tax=Pseudotsuga menziesii RepID=D7P705_PSEMZ 1.0e-13
FL-Next: tr=Class II chitinase 2-2; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Sma3: Class IV chitinase 8.411e-14
Internal
sp_v3.0_unigene75791 SustainPine v3.0 405
AutoFact: Nuclear transport factor 2 n=5 Tax=Brassicaceae RepID=NTF2_ARATH 9.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Nuclear transport factor 2 2.385e-19
N-terminus
sp_v3.0_unigene82435 SustainPine v3.0 361
AutoFact: FAP multi-domain protein 2.0e-17
Sma3: Putative glycine-rich cell wall structural protein 6.895e-10
coding
sp_v3.0_unigene98298 SustainPine v3.0 249
AutoFact: FAP multi-domain protein 6.0e-17
Sma3: Glycine-rich protein 5.691e-11
coding
sp_v3.0_unigene109737 SustainPine v3.0 511
AutoFact: Class II chitinase 2-1 n=1 Tax=Pseudotsuga menziesii RepID=D7P704_PSEMZ 5.0e-26
FL-Next: tr=Class VII chitinase; Picea engelmannii x Picea glauca. 0.0
N-terminus
sp_v3.0_unigene127631 SustainPine v3.0 460
AutoFact: Class IV chitinase 4-5 n=2 Tax=Pseudotsuga menziesii RepID=D7P711_PSEMZ 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chitinase 4.394e-14
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain