Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v3.0

Name: Plant lipid transfer protein/hydrophobic protein helical domain

Term: IPR013770  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene75200 SustainPine v3.0 326
• AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 5.292e-10
Internal
sp_v3.0_unigene75655 SustainPine v3.0 377
• AutoFact: Non-specific lipid-transfer protein n=2 Tax=Picea sitchensis RepID=A9NKD5_PICSI 5.0e-34
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus sylvestris (Scots pine). 0.0
Putative C-terminus
sp_v3.0_unigene75939 SustainPine v3.0 352
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9T1H2_RICCO 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 4.56e-15
Internal
sp_v3.0_unigene77507 SustainPine v3.0 451
• AutoFact: Non-specific lipid-transfer protein n=2 Tax=Picea sitchensis RepID=A9NNU8_PICSI 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene78246 SustainPine v3.0 242
• AutoFact: Unassigned protein
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: PrLTP1 2.924e-06
C-terminus
sp_v3.0_unigene78390 SustainPine v3.0 250
• AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 7.0e-12
• FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
C-terminus
sp_v3.0_unigene78932 SustainPine v3.0 416
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 2.668e-11
Putative N-terminus
sp_v3.0_unigene79125 SustainPine v3.0 343
• AutoFact: Non-specific lipid-transfer protein n=1 Tax=Picea sitchensis RepID=B8LRP3_PICSI 2.0e-16
• FL-Next: sp=Non-specific lipid-transfer protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene79163 SustainPine v3.0 299
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 3.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 5.637e-35
Internal
sp_v3.0_unigene79288 SustainPine v3.0 463
• AutoFact: Non-specific lipid-transfer protein n=4 Tax=Picea sitchensis RepID=A9NJW4_PICSI 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Nonspecific lipid transfer protein 2.049e-15
Misassembled
sp_v3.0_unigene79599 SustainPine v3.0 271
• AutoFact: Non-specific lipid-transfer protein n=2 Tax=Picea sitchensis RepID=A9NKD5_PICSI 3.0e-25
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Nonspecific lipid transfer protein 1.668e-07
Putative C-terminus
sp_v3.0_unigene80125 SustainPine v3.0 92
• AutoFact: Unassigned protein
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: PrLTP1 2.924e-06
Putative C-terminus
sp_v3.0_unigene80683 SustainPine v3.0 272
• AutoFact: Non-specific lipid-transfer protein n=2 Tax=Picea sitchensis RepID=A9NKD5_PICSI 3.0e-27
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus sylvestris (Scots pine). 0.0
• Sma3: Nonspecific lipid transfer protein 1.144e-07
Putative N-terminus
sp_v3.0_unigene80868 SustainPine v3.0 232
• AutoFact: Non-specific lipid-transfer protein n=1 Tax=Pinus radiata RepID=O24485_PINRA 6.0e-28
• FL-Next: sp=Non-specific lipid-transfer protein 3; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: PrLTP1 2.924e-06
Putative C-terminus
sp_v3.0_unigene81083 SustainPine v3.0 236
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 6.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative 9.304e-06
Internal
sp_v3.0_unigene81343 SustainPine v3.0 194
• AutoFact: Nonspecific lipid transfer protein (Fragment) n=1 Tax=Pinus taeda RepID=Q94IS5_PINTA 1.0e-06
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus resinosa (Red pine) (Norway pine). 0.0
N-terminus
sp_v3.0_unigene81532 SustainPine v3.0 231
• AutoFact: Unassigned protein
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus sylvestris (Scots pine). 0.0
N-terminus
sp_v3.0_unigene81575 SustainPine v3.0 168
• AutoFact: Non-specific lipid-transfer protein n=1 Tax=Pinus radiata RepID=O24485_PINRA 9.0e-21
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: PrLTP1 2.924e-06
Internal
sp_v3.0_unigene81800 SustainPine v3.0 189
• AutoFact: 40S ribosomal protein S15a-4 [Arabidopsis thaliana] sp|Q9LX88.3|R15A4_ARATH RecName: Full=40S ribosomal protein S15a-4 emb|CAB90931.1| cytoplasmic ribosomal protein S15a-like [Arabidopsis thaliana] gb|AAK76511.1| putative cytoplasmic ribosomal protein S15 2.0e-08
• FL-Next: sp=Non-specific lipid-transfer protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Putative C-terminus
sp_v3.0_unigene82534 SustainPine v3.0 406
• AutoFact: Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7S7R9_NEMVE 4.0e-05
• Sma3: Repetitive proline-rich cell wall protein 1 1.248e-09
coding

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain