Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Zinc finger, RanBP2-type

Term: IPR001876  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene142008 SustainPine v3.0 359
AutoFact: Probable fibrillarin (Fragment) n=2 Tax=Picea RepID=O65058_PICMA 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Fibrillarin, putative 6.336e-08
Putative N-terminus
sp_v3.0_unigene142367 SustainPine v3.0 596
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9T6Y2_RICCO 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 4.026e-39
N-terminus
sp_v3.0_unigene150568 SustainPine v3.0 530
AutoFact: Elongation factor 1-alpha n=21 Tax=Branchiopoda RepID=EF1A_ARTSA 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Elongation factor 1-alpha 0.0
Putative N-terminus
sp_v3.0_unigene150717 SustainPine v3.0 399
AutoFact: 60S ribosomal protein L24 n=3 Tax=Otophysi RepID=RL24_DANRE 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L24 3.399e-18
N-terminus
sp_v3.0_unigene151339 SustainPine v3.0 315
AutoFact: ribosomal protein L24 [Anopheles funestus] 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L24 2.268e-18
Internal
sp_v3.0_unigene155122 SustainPine v3.0 442
AutoFact: PREDICTED: 60S ribosomal protein L24-like n=1 Tax=Pan troglodytes RepID=UPI0000E20F84 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene155795 SustainPine v3.0 480
AutoFact: ribosomal protein L24 [Xenopus laevis] gb|AAH78474.1| MGC85232 protein [Xenopus laevis] 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: 60S ribosomal protein L24 1.911e-18
N-terminus
sp_v3.0_unigene161637 SustainPine v3.0 436
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 7.0e-34
FL-Next: sp=Zinc finger protein VAR3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
sp_v3.0_unigene163627 SustainPine v3.0 247
AutoFact: Unassigned protein 8.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene164101 SustainPine v3.0 249
AutoFact: Unassigned protein 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene165230 SustainPine v3.0 97
AutoFact: Unassigned protein 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene170036 SustainPine v3.0 237
AutoFact: GRP multi-domain protein 1.0e-10
Sma3: Putative glycine-rich protein 2.016e-08
coding
sp_v3.0_unigene171386 SustainPine v3.0 283
AutoFact: Herpes_gp2 multi-domain protein 2.0e-14
Sma3: Glycine-rich protein 9.342e-12
coding
sp_v3.0_unigene171933 SustainPine v3.0 418
AutoFact: DUF1777 multi-domain protein 7.0e-10
Sma3: ATP-dependent RNA helicase DDX23 2.447e-09
coding
sp_v3.0_unigene182960 SustainPine v3.0 515
AutoFact: zinc ion binding protein [Arabidopsis thaliana] dbj|BAF00982.1| hypothetical protein [Arabidopsis thaliana] gb|ABM06032.1| At1g55915 [Arabidopsis thaliana] gb|AEE33319.1| zinc ion binding protein [Arabidopsis thaliana] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
C-terminus
sp_v3.0_unigene184592 SustainPine v3.0 235
AutoFact: zinc ion binding protein [Arabidopsis thaliana] dbj|BAF00982.1| hypothetical protein [Arabidopsis thaliana] gb|ABM06032.1| At1g55915 [Arabidopsis thaliana] gb|AEE33319.1| zinc ion binding protein [Arabidopsis thaliana] 2.0e-08
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene188467 SustainPine v3.0 384
AutoFact: 60S ribosomal protein L24 [Aspergillus niger CBS 513.88] emb|CAK41233.1| unnamed protein product [Aspergillus niger] 2.0e-05
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Sma3: 60S ribosomal protein L24 5.017e-11
C-terminus
sp_v3.0_unigene188989 SustainPine v3.0 598
coding
sp_v3.0_unigene189347 SustainPine v3.0 562
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9T6Y2_RICCO 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Phototropin 3.981e-39
N-terminus
sp_v3.0_unigene189775 SustainPine v3.0 508
AutoFact: rhomboid-like protein 14 [Arabidopsis thaliana] gb|AEE75980.1| rhomboid-like protein 14 [Arabidopsis thaliana] 2.0e-27
FL-Next: sp=Uncharacterized protein At3g17611; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain