Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Cyclic nucleotide-binding domain

Term: IPR000595  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene79563 SustainPine v3.0 251
AutoFact: cyclic nucleotide and calmodulin-regulated ion channel-like protein [Arabidopsis thaliana] 2.0e-32
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel, putative 1.3e-22
Internal
sp_v3.0_unigene83002 SustainPine v3.0 461
Sma3: Cyclic nucleotide-gated ion channel, putative 2.633e-08
coding
sp_v3.0_unigene95622 SustainPine v3.0 592
AutoFact: plastocyanin-like domain-containing protein [Arabidopsis thaliana] gb|AAB95306.1| putative phytocyanin [Arabidopsis thaliana] gb|AEC07879.1| plastocyanin-like domain-containing protein [Arabidopsis thaliana] 6.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative glycine-rich cell wall structural protein 1.958e-07
N-terminus
sp_v3.0_unigene97112 SustainPine v3.0 285
AutoFact: K+ channel protein n=2 Tax=Populus RepID=Q8S9G1_9ROSI 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Inward rectifying potassium channel 4.01e-12
Internal
sp_v3.0_unigene97583 SustainPine v3.0 233
AutoFact: inward rectifying potassium channel [Vitis vinifera] 9.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene97615 SustainPine v3.0 221
AutoFact: DUF3354 domain containing protein 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v3.0_unigene98788 SustainPine v3.0 651
AutoFact: putative imbibition protein homolog [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Stachyose synthase, putative 3.88e-15
N-terminus
sp_v3.0_unigene98939 SustainPine v3.0 392
AutoFact: Potassium channel n=1 Tax=Zygophyllum xanthoxylum RepID=D0EM91_9ROSI 3.0e-12
FL-Next: sp=Probable potassium channel AKT5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative AKT1-like potassium channel 8.031e-08
Internal
sp_v3.0_unigene99028 SustainPine v3.0 315
AutoFact: putative alkaline alpha-galactosidase seed imbibition protein [Oryza sativa Japonica Group] gb|AAL65392.2| alkaline alpha-galactosidase [Oryza sativa Japonica Group] gb|EAZ07475.1| hypothetical protein OsI_29734 [Oryza sativa Indica Group] 1.0e-25
FL-Next: sp=Probable galactinol--sucrose galactosyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Alkaline alpha galactosidase 1.679e-08
Internal
sp_v3.0_unigene99606 SustainPine v3.0 857
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9SIE1_RICCO 1.0e-07
FL-Next: sp=Cyclic nucleotide-gated ion channel 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel 2 1.141e-08
Putative C-terminus
sp_v3.0_unigene101407 SustainPine v3.0 940
AutoFact: putative protein phosphatase 2C [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene101539 SustainPine v3.0 675
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9SIE1_RICCO 2.0e-40
FL-Next: sp=Cyclic nucleotide-gated ion channel 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Cyclic nucleotide-gated ion channel 2 6.561e-12
Internal
sp_v3.0_unigene102316 SustainPine v3.0 854
AutoFact: putative protein phosphatase 2C [Arabidopsis thaliana] 4.0e-27
FL-Next: sp=Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v3.0_unigene103024 SustainPine v3.0 316
AutoFact: putative galactinol--sucrose galactosyltransferase 6 [Arabidopsis thaliana] gb|AAL90901.1| AT5g20250/F5O24_140 [Arabidopsis thaliana] gb|AAN18198.1| At5g20250/F5O24_140 [Arabidopsis thaliana] dbj|BAE99252.1| seed imbitition protein-like [Arabidopsis thali 8.0e-36
FL-Next: sp=Probable galactinol--sucrose galactosyltransferase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Seed imbibition protein 3.703e-11
Internal
sp_v3.0_unigene104025 SustainPine v3.0 402
AutoFact: Na+/H+ antiporter n=4 Tax=Oryza sativa RepID=Q5ICN3_ORYSJ 0.0
FL-Next: sp=Sodium/hydrogen exchanger; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Na+/H+ antiporter 5.064e-12
Internal
sp_v3.0_unigene104026 SustainPine v3.0 331
AutoFact: cyclic nucleotide gated channel 19 [Arabidopsis thaliana] sp|Q9LDR2.1|CNG19_ARATH RecName: Full=Putative cyclic nucleotide-gated ion channel 19; AltName: Full=Cyclic nucleotide-binding transporter 2 gb|AAF73129.1|AF148542_1 cyclic nucleotide-binding trans 6.0e-17
FL-Next: sp=Putative cyclic nucleotide-gated ion channel 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Chromosome undetermined scaffold_109, whole genome shotgun sequence 8.694e-06
Internal
sp_v3.0_unigene104339 SustainPine v3.0 283
AutoFact: Potassium channel AKT2/3 n=2 Tax=Arabidopsis RepID=AKT2_ARATH 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Potassium channel 1.809e-15
Internal
sp_v3.0_unigene106351 SustainPine v3.0 306
AutoFact: Sodium/hydrogen exchanger plant, putative n=1 Tax=Ricinus communis RepID=B9S7C8_RICCO 6.0e-33
FL-Next: sp=Sodium/hydrogen exchanger 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative Na/H antiporter 2.278e-11
Internal
sp_v3.0_unigene106691 SustainPine v3.0 488
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_15.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7UAQ2_VITVI 0.0
FL-Next: Isoform 3 of Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 0.0
Sma3: Alkaline alpha-galactosidase 7.858e-12
Internal
sp_v3.0_unigene106757 SustainPine v3.0 255
AutoFact: Potassium channel NKT1 n=1 Tax=Nicotiana tabacum RepID=Q5NT80_TOBAC 4.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative AKT1-like potassium channel 5.235e-08
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain